Non-Coding RNA Search

Ss1.1-rspc003_d9.5

Sequence:


               
               TGCTGATGCAGCAACTGCCAATGCCCACAGTCTCCATGTCATGGGGGCTGCTGGGCAGCC
AGCCTGGAGGACTCAAATTTCTTCAATCTGAAGATATGCATCTTTCTTCAAGGATGTGCA
AAAAAAGATATTGTACAACCATCATAATGGCAAAAATTAAAACTTATCAAGTGTTGGCAA
GGATATGGGAAAAATTCTCATATGCTACCAATGAGAATTTATAAATGATTACAACATTTC
TGGGGTGCCATCTGGGGGTACTAGCAAAACAGGATAACCTAAGATCAAGCAATTATAATT
TTAGGCACCAATCCTGAGAAAACTTGCATTCATAGAAAAAGGAGATACATGCACATCTGT
TCAGTGAAGCATTGTTTGCCATTGGGAAAAAAAGAGAAAGAAATTAATCAAAATGTTCAA
TAGGAGGATATATGAATCTTTAACGTAATTTTCAAAAATAAAATCCTGAACAGCAGTTAA
AACAAATGAATCAGATATACTCACACAAGGTAGGCAAATTTGGAAGACAAAATGAGAAAT
ATAATAAAGTAAAAAGTAGATGATAAATGCAACACAATTCCCTATGGATAAATTTTAACC
ACCCACAATACTATAATTGCCCAATATGTAGAAACCATGAGATTTCACATTTTCTACAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCTGATGCAGCAACTGCCAATGCCCACAGTCTCCATGTCATGGGGGCTGCTGGGCAGCC
AGCCTGGAGGACTCAAATTTCTTCAATCTGAAGATATGCATCTTTCTTCAAGGATGTGCA
AAAAAAGATATTGTACAACCATCATAATGGCAAAAATTAAAACTTATCAAGTGTTGGCAA
GGATATGGGAAAAATTCTCATATGCTACCAATGAGAATTTATAAATGATTACAACATTTC
TGGGGTGCCATCTGGGGGTACTAGCAAAACAGGATAACCTAAGATCAAGCAATTATAATT
TTAGGCACCAATCCTGAGAAAACTTGCATTCATAGAAAAAGGAGATACATGCACATCTGT
TCAGTGAAGCATTGTTTGCCATTGGGAAAAAAAGAGAAAGAAATTAATCAAAATGTTCAA
TAGGAGGATATATGAATCTTTAACGTAATTTTCAAAAATAAAATCCTGAACAGCAGTTAA
AACAAATGAATCAGATATACTCACACAAGGTAGGCAAATTTGGAAGACAAAATGAGAAAT
ATAATAAAGTAAAAAGTAGATGATAAATGCAACACAATTCCCTATGGATAAATTTTAACC
ACCCACAATACTATAATTGCCCAATATGTAGAAACCATGAGATTTCACATTTTCTACAAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               68-656, gnl|bosTau2|chr22 (10151595-10152178)
               

               
               68-656, gnl|Hg17|chr3 (39540937-39541546)
               

               
               68-656, gnl|Mm7|chr9 (119875418-119876017)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               68-656, gnl|bosTau2|chr22 (10151595-10152178)
               

               
               68-656, gnl|Hg17|chr3 (39540937-39541546)
               

               
               68-656, gnl|Mm7|chr9 (119875418-119876017)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               spc (0.793561)
               

               
               fco (0.314416)
               

               
               fbs (0.175346)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spc (0.793561)
               

               
               fco (0.314416)
               

               
               fbs (0.175346)

	68-656, gnl\|bosTau2\|chr22 (10151595-10152178)
	68-656, gnl\|Hg17\|chr3 (39540937-39541546)
	68-656, gnl\|Mm7\|chr9 (119875418-119876017)