Non-Coding RNA Search

Ss1.1-rspc003_h10.5

Sequence:


               
               TAAAGGTGAAGCAATAGAAATTTACAGTCTCTTGACAGAATTCCTCTTGTTTTATACATT
GTCACAGCTGGCAACTGGTAGTGATATTTAATCCAGTCCAACAACTCCAGGCTGGGTTGA
ATGAAAGGTCATATTGTCTAAATTCCAGATGGAATTAAATATAATGACAGAGACTAAGTT
TTCCTTACATTTAAGGGAAATCACTCTTTAGAAATACTAATAAGAATGGTGTTGCTTTAA
TTGGGATCAACTCATTTGGGTAGCTACTCGCTACTCTGAAGAGTTTCTTATTTCTTGGAG
GGAAAAAAAATCTGTATAGTTACGTTCATGCTAGTAGCAGCTAAAAATTTCAGCCTTTGT
GCTCTGAAGTGGCCTCATTTGGAATTTCTCAGATTTTACGTTGTGCTAATTGATTATGTA
AAACAAATTACAAATAAAAAGCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAAAGGTGAAGCAATAGAAATTTACAGTCTCTTGACAGAATTCCTCTTGTTTTATACATT
GTCACAGCTGGCAACTGGTAGTGATATTTAATCCAGTCCAACAACTCCAGGCTGGGTTGA
ATGAAAGGTCATATTGTCTAAATTCCAGATGGAATTAAATATAATGACAGAGACTAAGTT
TTCCTTACATTTAAGGGAAATCACTCTTTAGAAATACTAATAAGAATGGTGTTGCTTTAA
TTGGGATCAACTCATTTGGGTAGCTACTCGCTACTCTGAAGAGTTTCTTATTTCTTGGAG
GGAAAAAAAATCTGTATAGTTACGTTCATGCTAGTAGCAGCTAAAAATTTCAGCCTTTGT
GCTCTGAAGTGGCCTCATTTGGAATTTCTCAGATTTTACGTTGTGCTAATTGATTATGTA
AAACAAATTACAAATAAAAAGCTC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-444, gnl|bosTau2|chr10 (60665090-60664667)
               

               
               1-444, gnl|Hg17|chr14 (73594895-73594131)
               

               
               1-444, gnl|Mm7|chr12 (82431129-82430711)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-444, gnl|bosTau2|chr10 (60665090-60664667)
               

               
               1-444, gnl|Hg17|chr14 (73594895-73594131)
               

               
               1-444, gnl|Mm7|chr12 (82431129-82430711)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

Help | Less info


               
               lyg (0.133103)
               

               
               kid (0.129735)
               

               
               spc (0.113366)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lyg (0.133103)
               

               
               kid (0.129735)
               

               
               spc (0.113366)

	1-444, gnl\|bosTau2\|chr10 (60665090-60664667)
	1-444, gnl\|Hg17\|chr14 (73594895-73594131)
	1-444, gnl\|Mm7\|chr12 (82431129-82430711)