Non-Coding RNA Search

Ss1.1-rspc003_p4.5

Sequence:


               
               TCAGATTTGACCTTGGGCCAGGAACTTCCATATGTTTCAGGTGGGGCCAAAAAAGAAAAG
GAAAGGAAACAAAACAAAAAAAATCTTAACCTGTTTTGAAGCTGGCCTGCTGGTGATCGG
CTGGGTGGTGGGGAAGCAGATTTTAACAACAGGTGATCCTTCCAGATCACTATATTTATT
TTGAGAAGAAAGAAAAAACTATTCTGTTACATTCCCCATCAGCCTTCTGCTTAAAATTTC
AGAGTAATGCACAAGCCAGCTTTGAAAAGCAAGCATCGCCATGTATCATATGCTTTACAA
ACTATCTCTTTTGTGAGCTTAATGAAGTGGTCATAATTTGTGTAAACATGTCTCTGAAAT
GATTTTGGAGAGATGTGATTTATTTTTCTTATTTTTAAAATGCATTCCATTTCAAATAAA
GTATCTGTTGAGATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCAGATTTGACCTTGGGCCAGGAACTTCCATATGTTTCAGGTGGGGCCAAAAAAGAAAAG
GAAAGGAAACAAAACAAAAAAAATCTTAACCTGTTTTGAAGCTGGCCTGCTGGTGATCGG
CTGGGTGGTGGGGAAGCAGATTTTAACAACAGGTGATCCTTCCAGATCACTATATTTATT
TTGAGAAGAAAGAAAAAACTATTCTGTTACATTCCCCATCAGCCTTCTGCTTAAAATTTC
AGAGTAATGCACAAGCCAGCTTTGAAAAGCAAGCATCGCCATGTATCATATGCTTTACAA
ACTATCTCTTTTGTGAGCTTAATGAAGTGGTCATAATTTGTGTAAACATGTCTCTGAAAT
GATTTTGGAGAGATGTGATTTATTTTTCTTATTTTTAAAATGCATTCCATTTCAAATAAA
GTATCTGTTGAGATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               90-436, gnl|bosTau2|chr5 (1956512-1956185)
               

               
               90-436, gnl|Hg17|chr12 (74705844-74705498)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               90-436, gnl|bosTau2|chr5 (1956512-1956185)
               

               
               90-436, gnl|Hg17|chr12 (74705844-74705498)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               elu (0.385356)
               

               
               cmu (0.186393)
               

               
               pty (0.142714)
               

               
               lnt (0.142308)
               

               
               spc (0.113366)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               elu (0.385356)
               

               
               cmu (0.186393)
               

               
               pty (0.142714)
               

               
               lnt (0.142308)
               

               
               spc (0.113366)

	90-436, gnl\|bosTau2\|chr5 (1956512-1956185)
	90-436, gnl\|Hg17\|chr12 (74705844-74705498)

	elu (0.385356)
	cmu (0.186393)
	pty (0.142714)
	lnt (0.142308)
	spc (0.113366)