Ss1.1-rspc005_o13.5.5
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CACAGGCAGACACCTGATGCACCAACAAGGTCATGGATTTCTGTCCTTGAGTGAGGGCAG
CCAGACCCAGCCAAGCTCAAAGGGCAAGTGAGGATACAAGAGCAACACCAGAGGAAGTCC
TGCTCAAGGTGTAGGGCTGGGGTGAGAGGGAGTGCCAGGAGAAGTGGGGAAGCATGCTCG
ATTCAGCTGAGCTTTAGCTCAGAAAACCATGCTCCTGGAAAGAGGAAGCTGGCCAAGTAC
TGTTCCAAGGCAGCGGGAGGGCGAAGCCAGAGCATCCTGCTTCTTTACGTGGGGAGGCCA
GTTCTCTGTGGAAGTGGCAATACAAAGGCAGGGGAATTGAACTACTCAGAACCTTCAGGG
AGAAATATTTCCTGCCCAAATTCAGGTGCTAAACAAACAACAAAATGAGAACCTCTACTA
TGAAGAGTTTCCAACCATGAGATATCCGAGGACATTACATTCCTGGGAATAAAGCCAGGG
GTGCCATGACAGACAACTAGAAAGAACAACTTAGTGGGCCAGCCCCACTCCAGTAAGACC
CAAGGAGGAAACTTCATATTCCTTTAGCCTGTTTTAGCTTTTGGCAAAGCCAGACCCCAT
GCTCCAAGCTTGCTGGGTTCTATCCTCCATATCATCCAGAAGATACACTGTTACTGCAGA
AGGTGACACTGAGGAGAGAGCGCGGTGTATATTTATTCATGTAAAAAAAACCCTGGGTAT
AAGCACAGCAATGTTAATAACTAGAAATTACTGAATTTTCTATGTTGTCTGTTGTGGAAA
TAAAGCCCTCTGGGGATGGATCAAAAATATCTGGAAATTACTTGAAACTGGTGAATAACT
AAATGGAATGATAACTAAAATGTACTGTAATCCAATTGTATTTTTTGTCCTTTAAGGGTT
GTTTCCGGGGAGCACTATGCAGTGAATGTTACAAAAATGACATAAAACTCCAAAAGCTAC
TCTATGTAAATTTCTTGAGTGGGAATTCTCATGATGTTTGGCATATTACTCTGATAATTG
TATATGTCAATTGGTTTTATGTTCTGACATTTTGACCGCTTTGGGGAAAAATGAGGTGTA
TACCCAGAGTTTTCCTGGCAAATGCTTAAAAACTGGCCCTCTGGGTGGAAAATCCTGATT
GATGGTGTTTGCCAATTTCCATGGTGTAAATACTACTTCCACTCTGGCTGACTGCAAGCT
ATGAATGTGCTATCATTGAGTGCAGAACTGGGAAAGGATGTGCAATGTGGACACTTGTGA
GTCCATACAAGCCACTGTATATACCCAGGAGCCTGTGTGAAACTACAGTTTTTTACTAAA
AATATTGCCCCATAAATATACAAAGGTACCAGTGGAAGAAAAAATATAAAGGGAAAATAA
ATTCAAATTGGAAGCTCAAATGGAGAAAATAACAGGATTTTTTCAACTTTGTCTATATGC
TACATTTTATTATTATATGTTTAAAAGAAAACAAAGTATCTATGTGTCATCTCCAGTGTT
CTGAACTCTTAGTTTCTTTGGTGTTCCCTGAGATGGAGGCTAGGGTTTCTTTCCTTTCAG
ATATTGGTGCTAAGATGATGCTGTCCAAAGAATTGATGGGACCTGCTCACTGTGAAGCCA
GTTTCAGGATGGCTGAGCTGAGAGTGGTGACAGAAGAAAAGATGAGGAGCCTTCTGAATT
TGGGGAGGCAACACTTATATTTATATGTGTGGTTTGGTATGATAATATATTGCTTTAAAA
GTTAATGCTAATGGAAACAAGAAAAAAGCAGTTGTTCAAAAATTGAAAAAAATGGATTAA
TAAACTCTTCTATTAGAGCAAAAAAAAAAAAAAAAATTAAAACTGAGGTGAATTAGAAAT
ATCAATAAGAATCCACGGGCATGTTTTTAAAGGAGGTTTATTTGTTCCATCCCTACAGTG
ATTTATGCCGTTGGATATTTTTGCTGCCATCTGCCTAGTTCCAGTTGGAATGTGGGACAA
GCTTATTTGTAGAATTAGTGCTTATGGTTTCTAAAACTATTCTCCACTGCAAGGAACAAA
TGTCCTTGGAAGATAGTTGATTCCATATTTCTGGGCAGGGGAGAAAAAAACCAGGATTCA
TTTGTAAATTCTAGACATTGAAAGAAAGCAAGGTGGCATAGGGTATCAGAGAGTCATAAA
TCCATAATGATGCAAAAGAGAAGATAAAACAGAATTGCCTGAAAAACAGTCTCTGAAATT
GTTTACTGAAAAGGCTGTATTATTGATTAATAAAAATCATATGAGTTC
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Blue-coloured subsequences are predicted RNA structures by RNAz
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CACAGGCAGACACCTGATGCACCAACAAGGTCATGGATTTCTGTCCTTGAGTGAGGGCAG
CCAGACCCAGCCAAGCTCAAAGGGCAAGTGAGGATACAAGAGCAACACCAGAGGAAGTCC
TGCTCAAGGTGTAGGGCTGGGGTGAGAGGGAGTGCCAGGAGAAGTGGGGAAGCATGCTCG
ATTCAGCTGAGCTTTAGCTCAGAAAACCATGCTCCTGGAAAGAGGAAGCTGGCCAAGTAC
TGTTCCAAGGCAGCGGGAGGGCGAAGCCAGAGCATCCTGCTTCTTTACGTGGGGAGGCCA
GTTCTCTGTGGAAGTGGCAATACAAAGGCAGGGGAATTGAACTACTCAGAACCTTCAGGG
AGAAATATTTCCTGCCCAAATTCAGGTGCTAAACAAACAACAAAATGAGAACCTCTACTA
TGAAGAGTTTCCAACCATGAGATATCCGAGGACATTACATTCCTGGGAATAAAGCCAGGG
GTGCCATGACAGACAACTAGAAAGAACAACTTAGTGGGCCAGCCCCACTCCAGTAAGACC
CAAGGAGGAAACTTCATATTCCTTTAGCCTGTTTTAGCTTTTGGCAAAGCCAGACCCCAT
GCTCCAAGCTTGCTGGGTTCTATCCTCCATATCATCCAGAAGATACACTGTTACTGCAGA
AGGTGACACTGAGGAGAGAGCGCGGTGTATATTTATTCATGTAAAAAAAACCCTGGGTAT
AAGCACAGCAATGTTAATAACTAGAAATTACTGAATTTTCTATGTTGTCTGTTGTGGAAA
TAAAGCCCTCTGGGGATGGATCAAAAATATCTGGAAATTACTTGAAACTGGTGAATAACT
AAATGGAATGATAACTAAAATGTACTGTAATCCAATTGTATTTTTTGTCCTTTAAGGGTT
GTTTCCGGGGAGCACTATGCAGTGAATGTTACAAAAATGACATAAAACTCCAAAAGCTAC
TCTATGTAAATTTCTTGAGTGGGAATTCTCATGATGTTTGGCATATTACTCTGATAATTG
TATATGTCAATTGGTTTTATGTTCTGACATTTTGACCGCTTTGGGGAAAAATGAGGTGTA
TACCCAGAGTTTTCCTGGCAAATGCTTAAAAACTGGCCCTCTGGGTGGAAAATCCTGATT
GATGGTGTTTGCCAATTTCCATGGTGTAAATACTACTTCCACTCTGGCTGACTGCAAGCT
ATGAATGTGCTATCATTGAGTGCAGAACTGGGAAAGGATGTGCAATGTGGACACTTGTGA
GTCCATACAAGCCACTGTATATACCCAGGAGCCTGTGTGAAACTACAGTTTTTTACTAAA
AATATTGCCCCATAAATATACAAAGGTACCAGTGGAAGAAAAAATATAAAGGGAAAATAA
ATTCAAATTGGAAGCTCAAATGGAGAAAATAACAGGATTTTTTCAACTTTGTCTATATGC
TACATTTTATTATTATATGTTTAAAAGAAAACAAAGTATCTATGTGTCATCTCCAGTGTT
CTGAACTCTTAGTTTCTTTGGTGTTCCCTGAGATGGAGGCTAGGGTTTCTTTCCTTTCAG
ATATTGGTGCTAAGATGATGCTGTCCAAAGAATTGATGGGACCTGCTCACTGTGAAGCCA
GTTTCAGGATGGCTGAGCTGAGAGTGGTGACAGAAGAAAAGATGAGGAGCCTTCTGAATT
TGGGGAGGCAACACTTATATTTATATGTGTGGTTTGGTATGATAATATATTGCTTTAAAA
GTTAATGCTAATGGAAACAAGAAAAAAGCAGTTGTTCAAAAATTGAAAAAAATGGATTAA
TAAACTCTTCTATTAGAGCAAAAAAAAAAAAAAAAATTAAAACTGAGGTGAATTAGAAAT
ATCAATAAGAATCCACGGGCATGTTTTTAAAGGAGGTTTATTTGTTCCATCCCTACAGTG
ATTTATGCCGTTGGATATTTTTGCTGCCATCTGCCTAGTTCCAGTTGGAATGTGGGACAA
GCTTATTTGTAGAATTAGTGCTTATGGTTTCTAAAACTATTCTCCACTGCAAGGAACAAA
TGTCCTTGGAAGATAGTTGATTCCATATTTCTGGGCAGGGGAGAAAAAAACCAGGATTCA
TTTGTAAATTCTAGACATTGAAAGAAAGCAAGGTGGCATAGGGTATCAGAGAGTCATAAA
TCCATAATGATGCAAAAGAGAAGATAAAACAGAATTGCCTGAAAAACAGTCTCTGAAATT
GTTTACTGAAAAGGCTGTATTATTGATTAATAAAAATCATATGAGTTC
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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cbr (7.16662) |
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spc (6.34849) |
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fbs (6.13712) |
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cbe (3.11005) |
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fco (2.0437) |
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fhi (1.86536) |
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hyp (1.85688) |
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fce (0.271592) |
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fcc (0.197785) |
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ova (0.129132) |
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ret (0.128733) |
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cbr (7.16662) |
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spc (6.34849) |
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fbs (6.13712) |
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cbe (3.11005) |
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fco (2.0437) |
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fhi (1.86536) |
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hyp (1.85688) |
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fce (0.271592) |
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fcc (0.197785) |
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ova (0.129132) |
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ret (0.128733) |