Non-Coding RNA Search

Ss1.1-rspc006_p9.5

Sequence:


               
               GGAAATTTAGCATTTTAAATAAAACACTAACTTAAAAAACAAGCAGAAGCCTAGGGAAAT
GTGGAAATGCCATAGTTTTGGTTCAGACATCTAGAGAATTTGTGAGGATGAAATTCATTT
GGCCAGGATCCAAAGGAGCTTTGTTATGGTGGGCTGGCCTGCACAAATAAAACAGGCAAT
CTGAAGAAGCAAGCTGATATACATGAAAATGTCTTTTTGAAAGGTAAATATAATCAAAAA
CTCATATAATCTAAATGTTATTAACTCAAGTTTCCTATGGAGAGGTATTAGGAAATGGGA
GTGAATTTTAACCTGGACTATCAAGATATGTCTCCAGTTAGGTACACTGAATTGAACTAA
GCCAATAATAGTGCTAAAGTGGATATAAGGGAGTGTGCAGCGTGTGCCTAAAGGCATCTG
AAATCCTTTGTGAGTGGGGAGGGTGGAAGGCCTAGGGGTGGGGATGGAATTCCTCGATCA
AATGAAAGTAAATATCTGTTTGTAAGTGGCTAAGTTTCCCATCTGTAAAGTACAAATAAA
TAATATTTTGTATTTAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAAATTTAGCATTTTAAATAAAACACTAACTTAAAAAACAAGCAGAAGCCTAGGGAAAT
GTGGAAATGCCATAGTTTTGGTTCAGACATCTAGAGAATTTGTGAGGATGAAATTCATTT
GGCCAGGATCCAAAGGAGCTTTGTTATGGTGGGCTGGCCTGCACAAATAAAACAGGCAAT
CTGAAGAAGCAAGCTGATATACATGAAAATGTCTTTTTGAAAGGTAAATATAATCAAAAA
CTCATATAATCTAAATGTTATTAACTCAAGTTTCCTATGGAGAGGTATTAGGAAATGGGA
GTGAATTTTAACCTGGACTATCAAGATATGTCTCCAGTTAGGTACACTGAATTGAACTAA
GCCAATAATAGTGCTAAAGTGGATATAAGGGAGTGTGCAGCGTGTGCCTAAAGGCATCTG
AAATCCTTTGTGAGTGGGGAGGGTGGAAGGCCTAGGGGTGGGGATGGAATTCCTCGATCA
AATGAAAGTAAATATCTGTTTGTAAGTGGCTAAGTTTCCCATCTGTAAAGTACAAATAAA
TAATATTTTGTATTTAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               118-537, gnl|bosTau2|chr9 (14494442-14494006)
               

               
               118-537, gnl|Mm7|chr10 (57610145-57610566)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               118-537, gnl|bosTau2|chr9 (14494442-14494006)
               

               
               118-537, gnl|Mm7|chr10 (57610145-57610566)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               spc (0.340097)
               

               
               fce (0.271592)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spc (0.340097)
               

               
               fce (0.271592)

	118-537, gnl\|bosTau2\|chr9 (14494442-14494006)
	118-537, gnl\|Mm7\|chr10 (57610145-57610566)