Non-Coding RNA Search

Ss1.1-rspc011_g18.5

Sequence:


               
               CGGGGGAGCTGGATATCACCCCATTCATGGCCTCGAGCAAAGAGAGCAGGATGAATGCAC
AGTTGCAGCTGCCAACCAATAGTGGAAACGACGAGAATAAGTATTCCTTGTTTGCTGTGG
TTAATCACCAAGGAACCTTGGAGAGTGGCCACTACACCAGCTTCATCCGGCACCACAAGG
ACCAGTGGTTCAAGTGTGATGATGCCGTCATCACCAAGGCCAGTATTAAGGACGTTCTGG
ACAGTGAAGGGTATTTACTGTTCTATCACAAACAGGTCCTGGAACATGAGTCACAAAAAG
TGAAAGAAATGAACACACAAGCCTACTGAAGTGACACACAGACCTACCTACCTGTAATGG
AAGATGACAGCACCCAAACTACAACTGGCATCGAGATTTGTAAAGGACCTACTTGCATTG
GCCCACGGGCCTGACAGAGTAAGAATTGAACAGTTCCCAGTGTCTAAAAGGTCCCGATTG
GAAGAGAAGTAGAAGGGGCGGGAGAAGAGGCTCTAATCTAAGCAGTCACTTCAAGGAAAA
TTAAATGGCAGGAATGCTCTGGGTGGGGAAGGCAGGAGCAGGGAAATCCTGACACTGGTA
CATAGCCTATATTCCTCCAAAAGGTTGTGTGGGAAAGTGTGGGGTGGGAGGGGGGTGGTG
TGTGGGGGGGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGGGGAGCTGGATATCACCCCATTCATGGCCTCGAGCAAAGAGAGCAGGATGAATGCAC
AGTTGCAGCTGCCAACCAATAGTGGAAACGACGAGAATAAGTATTCCTTGTTTGCTGTGG
TTAATCACCAAGGAACCTTGGAGAGTGGCCACTACACCAGCTTCATCCGGCACCACAAGG
ACCAGTGGTTCAAGTGTGATGATGCCGTCATCACCAAGGCCAGTATTAAGGACGTTCTGG
ACAGTGAAGGGTATTTACTGTTCTATCACAAACAGGTCCTGGAACATGAGTCACAAAAAG
TGAAAGAAATGAACACACAAGCCTACTGAAGTGACACACAGACCTACCTACCTGTAATGG
AAGATGACAGCACCCAAACTACAACTGGCATCGAGATTTGTAAAGGACCTACTTGCATTG
GCCCACGGGCCTGACAGAGTAAGAATTGAACAGTTCCCAGTGTCTAAAAGGTCCCGATTG
GAAGAGAAGTAGAAGGGGCGGGAGAAGAGGCTCTAATCTAAGCAGTCACTTCAAGGAAAA
TTAAATGGCAGGAATGCTCTGGGTGGGGAAGGCAGGAGCAGGGAAATCCTGACACTGGTA
CATAGCCTATATTCCTCCAAAAGGTTGTGTGGGAAAGTGTGGGGTGGGAGGGGGGTGGTG
TGTGGGGGGGTG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|47219057|emb|CAG00196.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|47219057|emb|CAG00196.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               101-261, gnl|bosTau2|chr19 (28694970-28695130)
               

               
               101-261, gnl|Hg17|chr17 (20848256-20848096)
               

               
               101-261, gnl|Mm7|chr11 (61236887-61236730)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               101-261, gnl|bosTau2|chr19 (28694970-28695130)
               

               
               101-261, gnl|Hg17|chr17 (20848256-20848096)
               

               
               101-261, gnl|Mm7|chr11 (61236887-61236730)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               eli (0.151814)
               

               
               spc (0.113366)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eli (0.151814)
               

               
               spc (0.113366)

	101-261, gnl\|bosTau2\|chr19 (28694970-28695130)
	101-261, gnl\|Hg17\|chr17 (20848256-20848096)
	101-261, gnl\|Mm7\|chr11 (61236887-61236730)