Ss1.1-rspc014_b16.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AATTATGTTATGATAGCTTACGTAGCCGAATGTGATACTTGCCGAATGCCACATGTAAAC ACTTGATTATAAAAACTGCCCCCCTCCTCTCCAAATAAGTGCATTTATTTCCTGTATGTG CAATTGACAGATGACGCAATAATGAATGAGCAGTTAGAAACACATTATGCTTGAGATGTC TTAACCTATTCCTGAATGCCTTCTGTTTTCCAAAGGAGTGGTCAAGCCCTTGTCCAAAGC TCTCAATCCTGGAAGAGCTGGAGCAGGTGGGGCTGGGCGCTGGCCACTGAACCACGCCAG GGCGCACTTTTCCACTGAAGTCCACTTTCAATTGCTTATGTGCAATAAAACCAAGTGCTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AATTATGTTATGATAGCTTACGTAGCCGAATGTGATACTTGCCGAATGCCACATGTAAAC ACTTGATTATAAAAACTGCCCCCCTCCTCTCCAAATAAGTGCATTTATTTCCTGTATGTG CAATTGACAGATGACGCAATAATGAATGAGCAGTTAGAAACACATTATGCTTGAGATGTC TTAACCTATTCCTGAATGCCTTCTGTTTTCCAAAGGAGTGGTCAAGCCCTTGTCCAAAGC TCTCAATCCTGGAAGAGCTGGAGCAGGTGGGGCTGGGCGCTGGCCACTGAACCACGCCAG GGCGCACTTTTCCACTGAAGTCCACTTTCAATTGCTTATGTGCAATAAAACCAAGTGCTT |
| Aligned organism(s): 27 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
| 1-360, gnl|bosTau2|chr17 (39448687-39449046) | |
| 1-360, gnl|canFam2|chr26 (25765235-25764966) | |
| 1-360, gnl|canFam2|chr26 (25765235-25764966) | |
| 1-360, gnl|dasNov1|scaffold_58880 (7775-7506) | |
| 1-360, gnl|dasNov1|scaffold_58880 (7775-7506) | |
| 1-360, gnl|echTel1|scaffold_295848 (3907-3647) | |
| 1-360, gnl|echTel1|scaffold_295848 (3907-3647) | |
| 1-360, gnl|galGal2|chr15 (10987795-10988057) | |
| 1-360, gnl|galGal2|chr15 (10987801-10988057) | |
| 1-360, gnl|hg17|chr1 (116994068-116994330) | |
| 1-360, gnl|hg17|chr20 (40058590-40058862) | |
| 1-360, gnl|Hg17|chr22 (28211468-28211821) | |
| 1-360, gnl|loxAfr1|scaffold_14944 (17766-17492) | |
| 1-360, gnl|loxAfr1|scaffold_14944 (17766-17492) | |
| 1-360, gnl|mm7|chr11 (4890760-4891024) | |
| 1-360, gnl|mm7|chr11 (4890760-4891024) | |
| 1-360, gnl|Mm7|chr11 (4891120-4890768) | |
| 1-360, gnl|monDom2|scaffold_89 (3256025-3255746) | |
| 1-360, gnl|monDom2|scaffold_89 (3256016-3255746) | |
| 1-360, gnl|oryCun1|scaffold_201587 (39874-39610) | |
| 1-360, gnl|oryCun1|scaffold_201587 (39877-39610) | |
| 1-360, gnl|panTro1|chr1 (116814488-116814760) | |
| 1-360, gnl|panTro1|chr21 (42485929-42486202) | |
| 1-360, gnl|rheMac2|chr1 (119713305-119713580) | |
| 1-360, gnl|rheMac2|chr10 (22447760-22447483) | |
| 1-360, gnl|rn3|chr14 (85613940-85614201) | |
| 1-360, gnl|rn3|chr14 (85613937-85614201) |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-360, gnl|bosTau2|chr17 (39448687-39449046) | |
| 1-360, gnl|canFam2|chr26 (25765235-25764966) | |
| 1-360, gnl|canFam2|chr26 (25765235-25764966) | |
| 1-360, gnl|dasNov1|scaffold_58880 (7775-7506) | |
| 1-360, gnl|dasNov1|scaffold_58880 (7775-7506) | |
| 1-360, gnl|echTel1|scaffold_295848 (3907-3647) | |
| 1-360, gnl|echTel1|scaffold_295848 (3907-3647) | |
| 1-360, gnl|galGal2|chr15 (10987795-10988057) | |
| 1-360, gnl|galGal2|chr15 (10987801-10988057) | |
| 1-360, gnl|hg17|chr1 (116994068-116994330) | |
| 1-360, gnl|hg17|chr20 (40058590-40058862) | |
| 1-360, gnl|Hg17|chr22 (28211468-28211821) | |
| 1-360, gnl|loxAfr1|scaffold_14944 (17766-17492) | |
| 1-360, gnl|loxAfr1|scaffold_14944 (17766-17492) | |
| 1-360, gnl|mm7|chr11 (4890760-4891024) | |
| 1-360, gnl|mm7|chr11 (4890760-4891024) | |
| 1-360, gnl|Mm7|chr11 (4891120-4890768) | |
| 1-360, gnl|monDom2|scaffold_89 (3256025-3255746) | |
| 1-360, gnl|monDom2|scaffold_89 (3256016-3255746) | |
| 1-360, gnl|oryCun1|scaffold_201587 (39874-39610) | |
| 1-360, gnl|oryCun1|scaffold_201587 (39877-39610) | |
| 1-360, gnl|panTro1|chr1 (116814488-116814760) | |
| 1-360, gnl|panTro1|chr21 (42485929-42486202) | |
| 1-360, gnl|rheMac2|chr1 (119713305-119713580) | |
| 1-360, gnl|rheMac2|chr10 (22447760-22447483) | |
| 1-360, gnl|rn3|chr14 (85613940-85614201) | |
| 1-360, gnl|rn3|chr14 (85613937-85614201) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| fbs (0.701385) | |
| fhi (0.169578) | |
| hyp (0.142837) | |
| spc (0.113366) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fbs (0.701385) | |
| fhi (0.169578) | |
| hyp (0.142837) | |
| spc (0.113366) |