Non-Coding RNA Search

Ss1.1-rspc016_f12.5

Sequence:


               
               TATTTTTAAATTAAAAAATCCCATCAAAGCTCCTGAATCGGTTTCCACCATAATCACTGC
AGAATCGATCTTCTACAAGGGAGTCTATTACCAAATTGGAGATGTCGTTTCTGTGATTGA
CGAACAAGATGGAAAACCCTACTATGCTCAGATCAGGGGTTTTATCCAGGACCAGTATTG
TGAGAAGAGTGCAGCACTGACGTGGCTCATTCCCACTCTCTCCAGCCCCAGGGACCAGTT
TGACCCTGCATCCTACATCATAGGACCAGAGGAGGATCTTCCAAGGAAAATGGAATACTT
GGAATTTGTCTGTCACGCACCTTCTGAATACTTCAAGTCACGTTCCTCACCCTTCCCCAC
AGTTCCCACCAGACCAGAGAAGGGCTATATATGGACTCACGTTGGACCCACTCCTGCAAT
AACTATTAAGGAAACGGTTGCCAACCATTTGTAGTTTAAAAAGTAAACCCAGATTTCTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATTTTTAAATTAAAAAATCCCATCAAAGCTCCTGAATCGGTTTCCACCATAATCACTGC
AGAATCGATCTTCTACAAGGGAGTCTATTACCAAATTGGAGATGTCGTTTCTGTGATTGA
CGAACAAGATGGAAAACCCTACTATGCTCAGATCAGGGGTTTTATCCAGGACCAGTATTG
TGAGAAGAGTGCAGCACTGACGTGGCTCATTCCCACTCTCTCCAGCCCCAGGGACCAGTT
TGACCCTGCATCCTACATCATAGGACCAGAGGAGGATCTTCCAAGGAAAATGGAATACTT
GGAATTTGTCTGTCACGCACCTTCTGAATACTTCAAGTCACGTTCCTCACCCTTCCCCAC
AGTTCCCACCAGACCAGAGAAGGGCTATATATGGACTCACGTTGGACCCACTCCTGCAAT
AACTATTAAGGAAACGGTTGCCAACCATTTGTAGTTTAAAAAGTAAACCCAGATTTCTGG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|1669370|gb|AAB46345.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|1669370|gb|AAB46345.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               262-477, gnl|bosTau2|chr4 (1342130-1342345)
               

               
               262-477, gnl|Hg17|chr7 (91730335-91730664)
               

               
               262-477, gnl|Mm7|chr5 (3647588-3647302)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               262-477, gnl|bosTau2|chr4 (1342130-1342345)
               

               
               262-477, gnl|Hg17|chr7 (91730335-91730664)
               

               
               262-477, gnl|Mm7|chr5 (3647588-3647302)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               cbe (0.239234)
               

               
               hea (0.204499)
               

               
               mga (0.160205)
               

               
               spc (0.113366)
               

               
               cty (0.10408)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbe (0.239234)
               

               
               hea (0.204499)
               

               
               mga (0.160205)
               

               
               spc (0.113366)
               

               
               cty (0.10408)

	262-477, gnl\|bosTau2\|chr4 (1342130-1342345)
	262-477, gnl\|Hg17\|chr7 (91730335-91730664)
	262-477, gnl\|Mm7\|chr5 (3647588-3647302)

	cbe (0.239234)
	hea (0.204499)
	mga (0.160205)
	spc (0.113366)
	cty (0.10408)