Non-Coding RNA Search

Ss1.1-rspc017_n20.5

Sequence:


               
               GGAGTGTATGCTATAAAAATATTCAATCAATCACTATGTTGCACACTGGAAACTTATAAA
TCAGTGTAATTCAATAAAAAATAAAATGTTAAAAAAGTCACCGTTTGTGTGTTTGGCGCC
CTCTAGTGCACTATTTTTAAATGACACAATTTACCCTTGCTAAGCTGTAAACTGGAAGAG
GATGAAATGGAAATTTCAATCAACAGTCCCTCTCTGATTGATCCTCTTTTCCTGGCATCC
AAAGAGACCTTACCCCTCTCTGCATCTACACATTATTTCCTAGCCATGATACTCACTAGG
CTGTAACCTTGTACTAACTAGTTCCTTAATCTCTGAGCTTCAATTTCCTCATCTGTACAG
TAACCCTAAGAACTGTAATGTGGATGTCCTGCACATAGTAGGAGCTCAGTAATCACTCAC
TTTCCTTGTATATTTAATAGTCAATAACAAACATGTTTAAAGTAAGTAGTTAATCTTGAC
TCAGGTGTTATAATCTGTTAGTTGGGGAATGTGAAGAATGTTAATGAGTAGCTAAAAAAA
TAAAGGATAAAACCCTGGGTGTGATTGTATTCTCTGGTCTCCTCTTATTGAGGCAATTCA
TGCCAATTCTGAAGTCTAGAAGCATGTTAAATTTCTTTGCATCCTTCACAATGCCTGTAA
TTATATACCCTTAGGAAATATCTGCCTTGTTTTAATGTTCATGGCAAATGGTTATAGAAA
ATGCAGAATGATAGTAAATATTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAGTGTATGCTATAAAAATATTCAATCAATCACTATGTTGCACACTGGAAACTTATAAA
TCAGTGTAATTCAATAAAAAATAAAATGTTAAAAAAGTCACCGTTTGTGTGTTTGGCGCC
CTCTAGTGCACTATTTTTAAATGACACAATTTACCCTTGCTAAGCTGTAAACTGGAAGAG
GATGAAATGGAAATTTCAATCAACAGTCCCTCTCTGATTGATCCTCTTTTCCTGGCATCC
AAAGAGACCTTACCCCTCTCTGCATCTACACATTATTTCCTAGCCATGATACTCACTAGG
CTGTAACCTTGTACTAACTAGTTCCTTAATCTCTGAGCTTCAATTTCCTCATCTGTACAG
TAACCCTAAGAACTGTAATGTGGATGTCCTGCACATAGTAGGAGCTCAGTAATCACTCAC
TTTCCTTGTATATTTAATAGTCAATAACAAACATGTTTAAAGTAAGTAGTTAATCTTGAC
TCAGGTGTTATAATCTGTTAGTTGGGGAATGTGAAGAATGTTAATGAGTAGCTAAAAAAA
TAAAGGATAAAACCCTGGGTGTGATTGTATTCTCTGGTCTCCTCTTATTGAGGCAATTCA
TGCCAATTCTGAAGTCTAGAAGCATGTTAAATTTCTTTGCATCCTTCACAATGCCTGTAA
TTATATACCCTTAGGAAATATCTGCCTTGTTTTAATGTTCATGGCAAATGGTTATAGAAA
ATGCAGAATGATAGTAAATATTTA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               96-644, gnl|bosTau2|chr4 (22156413-22155846)
               

               
               96-644, gnl|Hg17|chr7 (104215826-104215317)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               96-644, gnl|bosTau2|chr4 (22156413-22155846)
               

               
               96-644, gnl|Hg17|chr7 (104215826-104215317)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               fce (0.271592)
               

               
               lyg (0.133103)
               

               
               ecc (0.115035)
               

               
               spc (0.113366)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)
               

               
               lyg (0.133103)
               

               
               ecc (0.115035)
               

               
               spc (0.113366)

	96-644, gnl\|bosTau2\|chr4 (22156413-22155846)
	96-644, gnl\|Hg17\|chr7 (104215826-104215317)