Non-Coding RNA Search

Ss1.1-rspc018_d6.5

Sequence:


               
               TATTGGTGTTACTTACTGCTCAACCAGACCTATGATACCATCCTTCCCTGGCGTCTTAAA
GGTGGAGAAATGGAGGCCCAGAGATCAAGTGATTTTCCAAGCCCCAGAGTCAGCTGGCAG
CAAAGAATCTTCTTGGGCCATTACTCCCTCGGAGAGAAGCAAATCCTTCATAGGGAATGC
TGGATGTGCCTGTGACAAACTATCAACCCAAGAAAGAAGAAGAGAAGGTGAAACCAAGAG
ACCAGCCTCTAGGAAAGACTGGCATCATTCCTGTGCAGAGGTCCTGGGGAAGTTTAGCAT
GCTGCTCGCAGGTAGAAAAGCTCAGAAAACAAAATTTTATAGGCAGGGAATAAATGCAAC
AAGGGAATTCTGACAAAGGTCTGGAGAATACCAAGCAAGGACAGCTTGTTATAAAGGGAA
AGGGGATGTAGAGAGTTTGTAGAAGATACAGCCTTCAATACAGCTGACCAGCTTAGAAGC
TTAAACCAGGTATACTCCTCATTCGAGATGAATAAAGTGGATGTTATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATTGGTGTTACTTACTGCTCAACCAGACCTATGATACCATCCTTCCCTGGCGTCTTAAA
GGTGGAGAAATGGAGGCCCAGAGATCAAGTGATTTTCCAAGCCCCAGAGTCAGCTGGCAG
CAAAGAATCTTCTTGGGCCATTACTCCCTCGGAGAGAAGCAAATCCTTCATAGGGAATGC
TGGATGTGCCTGTGACAAACTATCAACCCAAGAAAGAAGAAGAGAAGGTGAAACCAAGAG
ACCAGCCTCTAGGAAAGACTGGCATCATTCCTGTGCAGAGGTCCTGGGGAAGTTTAGCAT
GCTGCTCGCAGGTAGAAAAGCTCAGAAAACAAAATTTTATAGGCAGGGAATAAATGCAAC
AAGGGAATTCTGACAAAGGTCTGGAGAATACCAAGCAAGGACAGCTTGTTATAAAGGGAA
AGGGGATGTAGAGAGTTTGTAGAAGATACAGCCTTCAATACAGCTGACCAGCTTAGAAGC
TTAAACCAGGTATACTCCTCATTCGAGATGAATAAAGTGGATGTTATC

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               121-524, gnl|bosTau2|chr2 (42779117-42779515)
               

               
               121-524, gnl|Hg17|chr2 (196906129-196906520)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               121-524, gnl|bosTau2|chr2 (42779117-42779515)
               

               
               121-524, gnl|Hg17|chr2 (196906129-196906520)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               cbl (0.344392)
               

               
               tes (0.207814)
               

               
               sin (0.174948)
               

               
               spc (0.113366)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.344392)
               

               
               tes (0.207814)
               

               
               sin (0.174948)
               

               
               spc (0.113366)

	121-524, gnl\|bosTau2\|chr2 (42779117-42779515)
	121-524, gnl\|Hg17\|chr2 (196906129-196906520)