Non-Coding RNA Search

Ss1.1-rspc021_i23.5

Sequence:


               
               CGGGGGCCGCGGTGTTACCGGTGAAGAAGCCGAAAATGGAGCACGTCCAGGCTGACCACG
AGCTTTTCCTCCAGGCCTTTGAGAAACCAACGCAAATCTATAGATTTCTTCGAACTCGAA
ATCTGATAGCGCCAATATTTTTGCATAGAACTCTTACTTACATGTCTCATCGAAACTCCA
GAACAAACATCAAAAGGAAAACATCTCATCTGCAGCTTACATTTACTGGTTTCTTCCACA
AAAATGATAAGCCATCACAAAATTCAGAAAATGAACAAAATTCTGTTACCCTGGAAGTCC
TGCTTGTGAAAGTTTGCCACAAAAAAAGAAAGGATGTAAGTTGTCCAATAAGGCAAGTTC
CTACAGGTAAAAAGCAGGTGCCTTTGAATCCTGACCTCAATCAAACAAAACCTGGAAATT
TCCCGTCCCTTGCAGTTTCCAGTAATGAATTTGAACCTAGTAACAGCCATATGGTGAAGT
CTTACTCATTGCTATTTAGAGTGACTCGTCCAGGAAGAAGAGAGTTTAATGGAATGATTA
ATGGAGAAACCAATGAAAATATTGATGTCAATGAAGAACTTCCAGCTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGGGGCCGCGGTGTTACCGGTGAAGAAGCCGAAAATGGAGCACGTCCAGGCTGACCACG
AGCTTTTCCTCCAGGCCTTTGAGAAACCAACGCAAATCTATAGATTTCTTCGAACTCGAA
ATCTGATAGCGCCAATATTTTTGCATAGAACTCTTACTTACATGTCTCATCGAAACTCCA
GAACAAACATCAAAAGGAAAACATCTCATCTGCAGCTTACATTTACTGGTTTCTTCCACA
AAAATGATAAGCCATCACAAAATTCAGAAAATGAACAAAATTCTGTTACCCTGGAAGTCC
TGCTTGTGAAAGTTTGCCACAAAAAAAGAAAGGATGTAAGTTGTCCAATAAGGCAAGTTC
CTACAGGTAAAAAGCAGGTGCCTTTGAATCCTGACCTCAATCAAACAAAACCTGGAAATT
TCCCGTCCCTTGCAGTTTCCAGTAATGAATTTGAACCTAGTAACAGCCATATGGTGAAGT
CTTACTCATTGCTATTTAGAGTGACTCGTCCAGGAAGAAGAGAGTTTAATGGAATGATTA
ATGGAGAAACCAATGAAAATATTGATGTCAATGAAGAACTTCCAGCTA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               331-564, gnl|bosTau2|chr19 (10336410-10336643)
               

               
               331-564, gnl|Hg17|chr17 (27326612-27326845)
               

               
               331-564, gnl|Mm7|chr11 (80094937-80095170)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               331-564, gnl|bosTau2|chr19 (10336410-10336643)
               

               
               331-564, gnl|Hg17|chr17 (27326612-27326845)
               

               
               331-564, gnl|Mm7|chr11 (80094937-80095170)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               fco (0.157208)
               

               
               kid (0.129735)
               

               
               ova (0.129132)
               

               
               spc (0.113366)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.157208)
               

               
               kid (0.129735)
               

               
               ova (0.129132)
               

               
               spc (0.113366)

	331-564, gnl\|bosTau2\|chr19 (10336410-10336643)
	331-564, gnl\|Hg17\|chr17 (27326612-27326845)
	331-564, gnl\|Mm7\|chr11 (80094937-80095170)