Non-Coding RNA Search

Ss1.1-rspc022_m23.5

Sequence:


               
               CTGTGGCTCTGGGGTAGGCTGGCGGCTACAGCTCCGATGAGACCCCTAGCCTGGGAACCT
CCATATGCCGCGGGAGTGGCCCTAGAAAAGACAAAAACAAATAATAGGTTGATTTCCTCC
TCATTCAGTACATAAATGTTTTCCTGATATAAAAGAAATGGGATCTGAGTGTGTTTCAAG
TGACTTGCATTGTTTGGGAAAAGGGATTAGGAGCAAACACTCAAAACATTTTTTCTAAGC
AAAATTCTTGAAAAGCTGATGCACAGCATCTTCACAGATGAAACATTGCTCACATCCAAC
TACCTGATGTTGTCCCTTGAAAACCAACAGCGTGGCAGCAGCTGAATCTGTCTGTTCAGT
TTGTCAAGGAGGATGATCGTACTTTGAAGACAGACTTAAAAGAAGGTGAATATTTTGCAC
TTTTGATACTCTTAGGAACAAATAACTTATTTGGCAAATGGTGTCTTTTTTATGTTGTTT
TTGTTTTGTATCGTGAATAGGCACTGAAGCTGATGTTATTTTGTTTTAAGGATGTTACAG
ACTGGAAACAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGTGGCTCTGGGGTAGGCTGGCGGCTACAGCTCCGATGAGACCCCTAGCCTGGGAACCT
CCATATGCCGCGGGAGTGGCCCTAGAAAAGACAAAAACAAATAATAGGTTGATTTCCTCC
TCATTCAGTACATAAATGTTTTCCTGATATAAAAGAAATGGGATCTGAGTGTGTTTCAAG
TGACTTGCATTGTTTGGGAAAAGGGATTAGGAGCAAACACTCAAAACATTTTTTCTAAGC
AAAATTCTTGAAAAGCTGATGCACAGCATCTTCACAGATGAAACATTGCTCACATCCAAC
TACCTGATGTTGTCCCTTGAAAACCAACAGCGTGGCAGCAGCTGAATCTGTCTGTTCAGT
TTGTCAAGGAGGATGATCGTACTTTGAAGACAGACTTAAAAGAAGGTGAATATTTTGCAC
TTTTGATACTCTTAGGAACAAATAACTTATTTGGCAAATGGTGTCTTTTTTATGTTGTTT
TTGTTTTGTATCGTGAATAGGCACTGAAGCTGATGTTATTTTGTTTTAAGGATGTTACAG
ACTGGAAACAGA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               99-551, gnl|bosTau2|chr15 (32280036-32280494)
               

               
               99-551, gnl|Hg17|chr1 (15642985-15643508)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               99-551, gnl|bosTau2|chr15 (32280036-32280494)
               

               
               99-551, gnl|Hg17|chr1 (15642985-15643508)

Expressed library(ies): 5 entry(ies)

More info

Expressed library(ies): 5 entry(ies)

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               fbs (0.175346)
               

               
               sin (0.174948)
               

               
               hyp (0.142837)
               

               
               thg (0.126791)
               

               
               spc (0.113366)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.175346)
               

               
               sin (0.174948)
               

               
               hyp (0.142837)
               

               
               thg (0.126791)
               

               
               spc (0.113366)

	99-551, gnl\|bosTau2\|chr15 (32280036-32280494)
	99-551, gnl\|Hg17\|chr1 (15642985-15643508)

	fbs (0.175346)
	sin (0.174948)
	hyp (0.142837)
	thg (0.126791)
	spc (0.113366)