Non-Coding RNA Search

Ss1.1-rspc025_a12.5

Sequence:


               
               TTGTGACATGGGTTCAATCCCTGGCTGGGAAATTTGCAAAATTATGGTAAGATGAGTCTT
GGGTACATGGTTTTTGCTTGTTCATTTTGCTACTTTCTCTTCATGTATTTGAAGTTTTCC
ATAACTTTTTAAAAAGATATGTATGAAATTTTAAGCAGCTTGCAGTGAATGATTTTTATA
AATGGCTACCTATCAAAACTTACAGATATTGCTAAAGTTTCACACACTGGGATGTTGAAT
GTGCTCTAATGTATTTGGGAATTAAGATTGAGGATCCAGATTTTATCTAGTTTATCTATT
GATACATCTGTTGTAGTGCCTGTCCCATAGTACTTCATATTTTTAAAGAGTGACTGAGAA
AAGCAATTACAACTATTTGTGGAAAATAATGAAATAGAACTGTATTGTCTAATAAAGTAG
ATGCTAGTAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGTGACATGGGTTCAATCCCTGGCTGGGAAATTTGCAAAATTATGGTAAGATGAGTCTT
GGGTACATGGTTTTTGCTTGTTCATTTTGCTACTTTCTCTTCATGTATTTGAAGTTTTCC
ATAACTTTTTAAAAAGATATGTATGAAATTTTAAGCAGCTTGCAGTGAATGATTTTTATA
AATGGCTACCTATCAAAACTTACAGATATTGCTAAAGTTTCACACACTGGGATGTTGAAT
GTGCTCTAATGTATTTGGGAATTAAGATTGAGGATCCAGATTTTATCTAGTTTATCTATT
GATACATCTGTTGTAGTGCCTGTCCCATAGTACTTCATATTTTTAAAGAGTGACTGAGAA
AAGCAATTACAACTATTTGTGGAAAATAATGAAATAGAACTGTATTGTCTAATAAAGTAG
ATGCTAGTAAAAAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               39-427, gnl|bosTau2|chr18 (44242263-44242659)
               

               
               39-427, gnl|Hg17|chr19 (42816550-42815530)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               39-427, gnl|bosTau2|chr18 (44242263-44242659)
               

               
               39-427, gnl|Hg17|chr19 (42816550-42815530)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               fcc (0.197785)
               

               
               cmu (0.186393)
               

               
               gul (0.177588)
               

               
               fco (0.157208)
               

               
               spc (0.113366)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)
               

               
               cmu (0.186393)
               

               
               gul (0.177588)
               

               
               fco (0.157208)
               

               
               spc (0.113366)

	39-427, gnl\|bosTau2\|chr18 (44242263-44242659)
	39-427, gnl\|Hg17\|chr19 (42816550-42815530)

	fcc (0.197785)
	cmu (0.186393)
	gul (0.177588)
	fco (0.157208)
	spc (0.113366)