Non-Coding RNA Search

Ss1.1-rspc025_m8.5

Sequence:


               
               TAATAGCTCATGGTGGTTTCATTTGCGTTTCTCAAGTAGCCAATGATGCTGAGGATCTTT
CCATGTGCTAATGGATCATTCATGTATATTCTTTGATGAAATGTCTGTTCAGATCTTTTA
TTAATTGGGTTTTCTTATTTTTAAAAAGTAACAGTTCTTAAAATACTCTGGATACAAGTC
CTTTATAAGACATATGATTTGCAAGTATTTTCTCCAAGTCGGACATGTCTTTTCAGTATC
TTAATGGTGTCTTTTGAAGTGTGAATGTTTTTAATTTTAATAAGTCCAGTTTATTTGTTA
TTTATGGATCATGCTTTTCATATTGTATCTCTCTGCCTAACTCAAGGTCGCAAATGATTC
TCTCCTAAATTCCATTCCAGAAGTTTTACAGTTTCCCCTCTTACATTTGGGTCTGTGAGC
CGTGTTAAATTATTATTGTTTAAGGTGTGAGGTGGGATCTAAGTCTGTGTGGCTATCCAT
TGGTCTCAGCACCATGTGTTTAAAAGACTGTTTTCTCAAACGGAATTGCCTTGGTACCTC
TGTCAAAAATCAATTGATCATATATTTAAATGTTTATTTTAAGTTTCGAAATCGGGAATT
ACATCCTTTACTTTGTCTTCTTCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAATAGCTCATGGTGGTTTCATTTGCGTTTCTCAAGTAGCCAATGATGCTGAGGATCTTT
CCATGTGCTAATGGATCATTCATGTATATTCTTTGATGAAATGTCTGTTCAGATCTTTTA
TTAATTGGGTTTTCTTATTTTTAAAAAGTAACAGTTCTTAAAATACTCTGGATACAAGTC
CTTTATAAGACATATGATTTGCAAGTATTTTCTCCAAGTCGGACATGTCTTTTCAGTATC
TTAATGGTGTCTTTTGAAGTGTGAATGTTTTTAATTTTAATAAGTCCAGTTTATTTGTTA
TTTATGGATCATGCTTTTCATATTGTATCTCTCTGCCTAACTCAAGGTCGCAAATGATTC
TCTCCTAAATTCCATTCCAGAAGTTTTACAGTTTCCCCTCTTACATTTGGGTCTGTGAGC
CGTGTTAAATTATTATTGTTTAAGGTGTGAGGTGGGATCTAAGTCTGTGTGGCTATCCAT
TGGTCTCAGCACCATGTGTTTAAAAGACTGTTTTCTCAAACGGAATTGCCTTGGTACCTC
TGTCAAAAATCAATTGATCATATATTTAAATGTTTATTTTAAGTTTCGAAATCGGGAATT
ACATCCTTTACTTTGTCTTCTTCG

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               3-579, gnl|bosTau2|chr1 (44701125-44701733)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-579, gnl|bosTau2|chr1 (44701125-44701733)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ese (0.126502)
               

               
               spc (0.113366)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ese (0.126502)
               

               
               spc (0.113366)