Non-Coding RNA Search

Ss1.1-rspc026_b16.5

Sequence:


               
               TGCTCACACATACATTCAAAAACTGTATGGGATTATTTATGTTGGGTTTATTCAAAATTG
CCAAAGAACCAATAAAACCCAAATGTCCTTCAAGATAGATAAAAATCAAAACTTAATTTT
TAAAAATGTGAT------------------------------------------------
------------------------------------------------------------
------------------------------------------------AAAACCATAGAG
ATAGAGAACAAAGCAGTGATTGTCAGGGAAGGAAGGAGGGTTTGACTCTGAAGTGGCAGC
CTGAGAAAGTGTGCTTGCTTGTTTGTTTGGTAGAACTGTCTGTGTGGATTATGGTGGTGA
TTACACAACGCTAAGCATTTGTCAAAATTCATGGTATGTTACCCAAAAGCATGAATTTTA
TGTAAGTAAATTTCAAAATAAAAAGACATAATTGCTACTTTGGGAGAGTTAAAAAACAAG
GTGGAAACAAAATACTAGATAAGAAAACTTGGTAGAAGGGTGAAGTAGTCAGAGTTTAAA
CATTTGAAGTCTTTGTTTTGTCCAGGATGAAGACAGAAATATTGATTAATTTCAGACTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCTCACACATACATTCAAAAACTGTATGGGATTATTTATGTTGGGTTTATTCAAAATTG
CCAAAGAACCAATAAAACCCAAATGTCCTTCAAGATAGATAAAAATCAAAACTTAATTTT
TAAAAATGTGAT------------------------------------------------
------------------------------------------------------------
------------------------------------------------AAAACCATAGAG
ATAGAGAACAAAGCAGTGATTGTCAGGGAAGGAAGGAGGGTTTGACTCTGAAGTGGCAGC
CTGAGAAAGTGTGCTTGCTTGTTTGTTTGGTAGAACTGTCTGTGTGGATTATGGTGGTGA
TTACACAACGCTAAGCATTTGTCAAAATTCATGGTATGTTACCCAAAAGCATGAATTTTA
TGTAAGTAAATTTCAAAATAAAAAGACATAATTGCTACTTTGGGAGAGTTAAAAAACAAG
GTGGAAACAAAATACTAGATAAGAAAACTTGGTAGAAGGGTGAAGTAGTCAGAGTTTAAA
CATTTGAAGTCTTTGTTTTGTCCAGGATGAAGACAGAAATATTGATTAATTTCAGACTCT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               339-504, gnl|bosTau2|chr19 (41484802-41484972)
               

               
               339-504, gnl|Hg17|chr17 (42393373-42393529)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               339-504, gnl|bosTau2|chr19 (41484802-41484972)
               

               
               339-504, gnl|Hg17|chr17 (42393373-42393529)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               lyg (0.133103)
               

               
               spc (0.113366)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lyg (0.133103)
               

               
               spc (0.113366)

	339-504, gnl\|bosTau2\|chr19 (41484802-41484972)
	339-504, gnl\|Hg17\|chr17 (42393373-42393529)