Ss1.1-rspc028_i1.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGAAATGGACGCCTCCTCGGTCACCGTTTAATCTCGTCCAAGAAACACTTTTTCATGATC CATGGAAACTCCTCATTGCGACTATATTTCTCAATCGCACCTCAGGCAAAATGGCAATCC CTGTGCTTTGGGAGTTTCTGGAGAAGTATCCTTCTGCAGAGGTAGCAAGAACTGCAGACT GGAGAGATGTTTCAGAACTTCTTAAACCTCTTGGTCTCTACGATCACCGAGCAAAAACAA TTATCAAGTTTTCAGATGAGTATCTGACAAAGCAGTGGAGGTATCCGATTGAGCTTCATG GAATTGGCAAGTACGGCAATGACTCTTACCGAATTTTTTGTGTCAATGAGTGGAAGCAGG TACACCCTGAAGACCATAAGTTAAATAAGTATCATGACTGGCTTTGGGAAAATCATGAAA AGTTAAGTCTATCTTAAAACTCTGAAGTTTTCAAACTTGTTTTTTATACATTGCTTCGCG TTTTGATTCTTAAAAATTCCATTAAGCATGACCGACTACCTTTCCAAGTGTATAGATTTT AATCAGCCCAATTGGAAACCTAATGTATGTTTTCTTAATGTGTGTACCACTGGTAGATCT TTGCTACTGAATGTGCTAGACCATGTTTGGAAATTGTTTTTATAAAATAAATTATTTGAC AACAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGAAATGGACGCCTCCTCGGTCACCGTTTAATCTCGTCCAAGAAACACTTTTTCATGATC CATGGAAACTCCTCATTGCGACTATATTTCTCAATCGCACCTCAGGCAAAATGGCAATCC CTGTGCTTTGGGAGTTTCTGGAGAAGTATCCTTCTGCAGAGGTAGCAAGAACTGCAGACT GGAGAGATGTTTCAGAACTTCTTAAACCTCTTGGTCTCTACGATCACCGAGCAAAAACAA TTATCAAGTTTTCAGATGAGTATCTGACAAAGCAGTGGAGGTATCCGATTGAGCTTCATG GAATTGGCAAGTACGGCAATGACTCTTACCGAATTTTTTGTGTCAATGAGTGGAAGCAGG TACACCCTGAAGACCATAAGTTAAATAAGTATCATGACTGGCTTTGGGAAAATCATGAAA AGTTAAGTCTATCTTAAAACTCTGAAGTTTTCAAACTTGTTTTTTATACATTGCTTCGCG TTTTGATTCTTAAAAATTCCATTAAGCATGACCGACTACCTTTCCAAGTGTATAGATTTT AATCAGCCCAATTGGAAACCTAATGTATGTTTTCTTAATGTGTGTACCACTGGTAGATCT TTGCTACTGAATGTGCTAGACCATGTTTGGAAATTGTTTTTATAAAATAAATTATTTGAC AACAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 103-253, gnl|bosTau2|chr8 (40783774-40783624) | |
| 103-253, gnl|canFam2|chr20 (8727288-8727099) | |
| 103-253, gnl|danRer3|chrNA (124319888-124319714) | |
| 103-253, gnl|dasNov1|scaffold_11653 (16464-16286) | |
| 103-253, gnl|echTel1|scaffold_136666 (619-431) | |
| 103-253, gnl|fr1|chrUn (73069009-73069164) | |
| 103-253, gnl|galGal2|chr12 (19396221-19396387) | |
| 103-253, gnl|hg17|chr3 (130634619-130634807) | |
| 103-253, gnl|Hg17|chr3 (130634791-130634641) | |
| 103-253, gnl|loxAfr1|scaffold_26599 (6625-6813) | |
| 103-253, gnl|mm7|chr6 (115870225-115870411) | |
| 103-253, gnl|Mm7|chr6 (115870395-115870245) | |
| 103-253, gnl|monDom2|scaffold_5 (40446576-40446756) | |
| 103-253, gnl|oryCun1|scaffold_213711 (88666-88478) | |
| 103-253, gnl|panTro1|chr2 (132688189-132688377) | |
| 103-253, gnl|rn3|chr4 (152218939-152219127) | |
| 103-253, gnl|tetNig1|chr9 (6702606-6702452) | |
| 103-253, gnl|xenTro1|scaffold_172 (1572261-1572428) | |
| 357-640, gnl|bosTau2|chr8 (40781797-40781512) | |
| 357-640, gnl|Hg17|chr3 (130633122-130632843) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 103-253, gnl|bosTau2|chr8 (40783774-40783624) | |
| 103-253, gnl|canFam2|chr20 (8727288-8727099) | |
| 103-253, gnl|danRer3|chrNA (124319888-124319714) | |
| 103-253, gnl|dasNov1|scaffold_11653 (16464-16286) | |
| 103-253, gnl|echTel1|scaffold_136666 (619-431) | |
| 103-253, gnl|fr1|chrUn (73069009-73069164) | |
| 103-253, gnl|galGal2|chr12 (19396221-19396387) | |
| 103-253, gnl|hg17|chr3 (130634619-130634807) | |
| 103-253, gnl|Hg17|chr3 (130634791-130634641) | |
| 103-253, gnl|loxAfr1|scaffold_26599 (6625-6813) | |
| 103-253, gnl|mm7|chr6 (115870225-115870411) | |
| 103-253, gnl|Mm7|chr6 (115870395-115870245) | |
| 103-253, gnl|monDom2|scaffold_5 (40446576-40446756) | |
| 103-253, gnl|oryCun1|scaffold_213711 (88666-88478) | |
| 103-253, gnl|panTro1|chr2 (132688189-132688377) | |
| 103-253, gnl|rn3|chr4 (152218939-152219127) | |
| 103-253, gnl|tetNig1|chr9 (6702606-6702452) | |
| 103-253, gnl|xenTro1|scaffold_172 (1572261-1572428) | |
| 357-640, gnl|bosTau2|chr8 (40781797-40781512) | |
| 357-640, gnl|Hg17|chr3 (130633122-130632843) |
| Expressed library(ies): 10 entry(ies) | More info |
| Expressed library(ies): 10 entry(ies) | Help | Less info |
| mgp (0.230681) | |
| cmu (0.186393) | |
| mga (0.160205) | |
| nca (0.136874) | |
| kid (0.129735) | |
| ova (0.129132) | |
| ret (0.128733) | |
| sug (0.127291) | |
| spc (0.113366) | |
| nbm (0.0993246) |
| Expressed library(ies): 10 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mgp (0.230681) | |
| cmu (0.186393) | |
| mga (0.160205) | |
| nca (0.136874) | |
| kid (0.129735) | |
| ova (0.129132) | |
| ret (0.128733) | |
| sug (0.127291) | |
| spc (0.113366) | |
| nbm (0.0993246) |