Ss1.1-rspc028_p1.5.5
|
GAAATATTTTCCATCAAGGTCTATCCCAGGAGATTGAATATAGTTTCGTGTGCTATATGG
TAGGACCTTACTGTCTATCCATTCTAAAAGTAATAGTTTGCAGCTATTAACCCCAAACTC
CCAGTCCATCCCACTCTCTTACCCCTCCCCTGGTGTAATTCATTTTTTAAATGCAAATTT
TAAAGTGGCCTTGACTGAGGCAATTCCGATATCTCAGTGGATATTTTAAACCACTGACGA
AGAACAGTAAGGGAATTTATAGACACCCTAGCAATCCGAGCAGCAACTTCTCTATTGTCA
GGGTCCCTGGAGAGGGTCCTAGGTAGGAATTTCATATTGGTTTTGTCTCCTCCTCAGGCC
CATGCACCAAAGCCATGAGTAGATGTCCACTTACCTGGTATTTTAAACTCTCTGTAAATT
ATTAGCCAAATAGAGCTGTGAGGGGGTTGTATTTATGGGCGTGTAGAAAGAACACACAAG
CACCTCATAGACCAGGATGATTAAGTTTGTTTTAAAAGGAAGAGCAGATAGCCCTGTCTT
GAGTTCCCTGGACAACTCCTAGACTTGAGATAATTGAGAATTATGGCCTGATTCCAGACC
CCAGAGCCAGCCTCCACCCTTCTCCCTTGCCTCTCTTTGTCCTTTTTTTTTTTATTTTTT
CTTGTCATTTCTACCCCCAGCTAGGGTCATTCAAAAACTGCCTGGGTGATCTGAGAAAAG
CCAGTAATCCAGTTTGGCCTGTTTTAATAGCATCTTCTCTCTCCGATGCTATCCCCCCCA
TCTGTGGTTGAGGAAAGAGTGATTCGTTCATTTTTCACACAGAAGGGCATTGAGTCCTGT
TGGGCCATTACCTGCATGTGGCAGCAGGACTTTCCATTTCTCCGAGGTTAGTGCTTGAAT
GAAGACTTATTTTGGCTGAGTCCACTGAGGTTGTGCCACTGAGTCCCGGGTGGCTGGTGG
TATAATCTTGGTGTTCTGATCACTTTCAAGCACTGCCATCACTTTGTTTCCGTGGGCTTC
TGTCACACAAGATGAAAATGAGAAGTGTTAGAATTGGAGAAGGTGATTTGGAATTCACCC
TCCTTTGCAGGCTGTTTTCATGGACCATTTCCTGTGTGTGAAAGTAGGAGAGCTGTGCTG
GTGGCTGGTGTCCTTGCAGAGAATGTGTGCAAGACTTGACTCCAAGCCTTTGTTGCCTAA
GGCACTTGTTAAAACTGTCGGCCGGAAACCAAATCCTTTGTACCCTCCTTTGTGCCAGGA
ATAGGTCCTTATTTCCCAGTTACTGTTTGAAGTAACATTTAAAAGCAATAGGAAAGAAAA
TGAGAAAGATATGTTAGTTGTCAGTTGTTCTGAGCCAGAACTGGGCAGATGTGGGAAATT
TCCGTATAGTGTATAAAAATTTCACTCTGCAGGGAAGTTGTTTTCCTCTGTGTCTCTTCT
TTGACCTTAATTGATTGAAAATAGCATTACTATTAAAATTATTCAAAATTTTACTGTTAC
TATAAAATTATTCAGAATATGTTACTATAAAATTATTCAAAATATTGTTACTATAAAATT
ATTCAAAATTTTACTGTTGCTATAAAATTCAAAATATCATGACAATGAAACTGCCTTAAT
TTGTAGACTATTAAAGTGATCTCC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GAAATATTTTCCATCAAGGTCTATCCCAGGAGATTGAATATAGTTTCGTGTGCTATATGG
TAGGACCTTACTGTCTATCCATTCTAAAAGTAATAGTTTGCAGCTATTAACCCCAAACTC
CCAGTCCATCCCACTCTCTTACCCCTCCCCTGGTGTAATTCATTTTTTAAATGCAAATTT
TAAAGTGGCCTTGACTGAGGCAATTCCGATATCTCAGTGGATATTTTAAACCACTGACGA
AGAACAGTAAGGGAATTTATAGACACCCTAGCAATCCGAGCAGCAACTTCTCTATTGTCA
GGGTCCCTGGAGAGGGTCCTAGGTAGGAATTTCATATTGGTTTTGTCTCCTCCTCAGGCC
CATGCACCAAAGCCATGAGTAGATGTCCACTTACCTGGTATTTTAAACTCTCTGTAAATT
ATTAGCCAAATAGAGCTGTGAGGGGGTTGTATTTATGGGCGTGTAGAAAGAACACACAAG
CACCTCATAGACCAGGATGATTAAGTTTGTTTTAAAAGGAAGAGCAGATAGCCCTGTCTT
GAGTTCCCTGGACAACTCCTAGACTTGAGATAATTGAGAATTATGGCCTGATTCCAGACC
CCAGAGCCAGCCTCCACCCTTCTCCCTTGCCTCTCTTTGTCCTTTTTTTTTTTATTTTTT
CTTGTCATTTCTACCCCCAGCTAGGGTCATTCAAAAACTGCCTGGGTGATCTGAGAAAAG
CCAGTAATCCAGTTTGGCCTGTTTTAATAGCATCTTCTCTCTCCGATGCTATCCCCCCCA
TCTGTGGTTGAGGAAAGAGTGATTCGTTCATTTTTCACACAGAAGGGCATTGAGTCCTGT
TGGGCCATTACCTGCATGTGGCAGCAGGACTTTCCATTTCTCCGAGGTTAGTGCTTGAAT
GAAGACTTATTTTGGCTGAGTCCACTGAGGTTGTGCCACTGAGTCCCGGGTGGCTGGTGG
TATAATCTTGGTGTTCTGATCACTTTCAAGCACTGCCATCACTTTGTTTCCGTGGGCTTC
TGTCACACAAGATGAAAATGAGAAGTGTTAGAATTGGAGAAGGTGATTTGGAATTCACCC
TCCTTTGCAGGCTGTTTTCATGGACCATTTCCTGTGTGTGAAAGTAGGAGAGCTGTGCTG
GTGGCTGGTGTCCTTGCAGAGAATGTGTGCAAGACTTGACTCCAAGCCTTTGTTGCCTAA
GGCACTTGTTAAAACTGTCGGCCGGAAACCAAATCCTTTGTACCCTCCTTTGTGCCAGGA
ATAGGTCCTTATTTCCCAGTTACTGTTTGAAGTAACATTTAAAAGCAATAGGAAAGAAAA
TGAGAAAGATATGTTAGTTGTCAGTTGTTCTGAGCCAGAACTGGGCAGATGTGGGAAATT
TCCGTATAGTGTATAAAAATTTCACTCTGCAGGGAAGTTGTTTTCCTCTGTGTCTCTTCT
TTGACCTTAATTGATTGAAAATAGCATTACTATTAAAATTATTCAAAATTTTACTGTTAC
TATAAAATTATTCAGAATATGTTACTATAAAATTATTCAAAATATTGTTACTATAAAATT
ATTCAAAATTTTACTGTTGCTATAAAATTCAAAATATCATGACAATGAAACTGCCTTAAT
TTGTAGACTATTAAAGTGATCTCC
|
|
155-474, gnl|bosTau2|chr22 (42787733-42787418) |
|
155-474, gnl|canFam2|chr20 (45799181-45798854) |
|
155-474, gnl|dasNov1|scaffold_6666 (58027-57681) |
|
155-474, gnl|echTel1|scaffold_319727 (94482-94170) |
|
155-474, gnl|hg17|chr3 (45695656-45695994) |
|
155-474, gnl|Hg17|chr3 (45695669-45695993) |
|
155-474, gnl|loxAfr1|scaffold_4573 (62149-61807) |
|
155-474, gnl|mm7|chr9 (123237655-123237968) |
|
155-474, gnl|Mm7|chr9 (123237665-123237972) |
|
155-474, gnl|oryCun1|scaffold_179058 (34975-34656) |
|
155-474, gnl|panTro1|chr2 (47031055-47031393) |
|
155-474, gnl|rheMac2|chr2 (90854248-90853915) |
|
155-474, gnl|rn3|chr8 (128314954-128315253) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
155-474, gnl|bosTau2|chr22 (42787733-42787418) |
|
155-474, gnl|canFam2|chr20 (45799181-45798854) |
|
155-474, gnl|dasNov1|scaffold_6666 (58027-57681) |
|
155-474, gnl|echTel1|scaffold_319727 (94482-94170) |
|
155-474, gnl|hg17|chr3 (45695656-45695994) |
|
155-474, gnl|Hg17|chr3 (45695669-45695993) |
|
155-474, gnl|loxAfr1|scaffold_4573 (62149-61807) |
|
155-474, gnl|mm7|chr9 (123237655-123237968) |
|
155-474, gnl|Mm7|chr9 (123237665-123237972) |
|
155-474, gnl|oryCun1|scaffold_179058 (34975-34656) |
|
155-474, gnl|panTro1|chr2 (47031055-47031393) |
|
155-474, gnl|rheMac2|chr2 (90854248-90853915) |
|
155-474, gnl|rn3|chr8 (128314954-128315253) |
|
hea (0.408998) |
|
sin (0.349895) |
|
kid (0.259471) |
|
tra (0.246184) |
|
mas (0.210305) |
|
cty (0.20816) |
|
sto (0.179824) |
|
fbs (0.175346) |
|
cag (0.151194) |
|
ski (0.146735) |
|
csk (0.140746) |
|
nca (0.136874) |
|
ssp (0.13552) |
|
ste (0.135208) |
|
sug (0.127291) |
|
spc (0.113366) |
|
jej (0.0989218) |
|
hea (0.408998) |
|
sin (0.349895) |
|
kid (0.259471) |
|
tra (0.246184) |
|
mas (0.210305) |
|
cty (0.20816) |
|
sto (0.179824) |
|
fbs (0.175346) |
|
cag (0.151194) |
|
ski (0.146735) |
|
csk (0.140746) |
|
nca (0.136874) |
|
ssp (0.13552) |
|
ste (0.135208) |
|
sug (0.127291) |
|
spc (0.113366) |
|
jej (0.0989218) |
