Non-Coding RNA Search

Ss1.1-rspc030_b7.5

Sequence:


               
               CAACACAAAGAGTTTTATTCATGGAAATTAGCAAAGGCTCAGAAAACCAGAAGTGCCTTT
CATCTGGCACCTGAAGAGGAGCTCCCTTCTGGCATTCAGCTCCTTTGTGATACTCTGTGA
GTAAGCAGGTGCCCATTGAGCAGAGACAAAGCTCCAAGGAACTGTGCCCTGGTCTAAGGG
CAATCAGCTTGTCATCCATATGCAGGTGAAGAAAAAGAAGGCATTTAGTAGCAGTATATG
CTTCCATGCTTTTTACAAAATGACTCATCTACTGGAAGCATGAATCTGTTTACTGAAATA
CTAATCCCAAGAGATTTTTTTTTTCAAAAAAAGGTGTCTAGTGCTCCAGAAAAGGTACAT
GATAAGCACTTTCTAATAATTAGCAATTCTATTTGGTTTCTCAAGAGAGGCAGAAAGTTG
AAATAAGTAGTACATTTGACAGCCAGTGTTGTTGCAAAAATATATGTGACCTCATTTCCA
GCTAAGTTGAATCCCCATGCTAAAAAGAAAAGAAACAAGCTGTGTGTGTGTGTAATTTTG
GTGCAAAGCAATGTACATATAATCCAGTGGTATGTTGGTAAATGTTTATTAACTGGCTTT
CAAGAAATAAAAACAAATCCCAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAACACAAAGAGTTTTATTCATGGAAATTAGCAAAGGCTCAGAAAACCAGAAGTGCCTTT
CATCTGGCACCTGAAGAGGAGCTCCCTTCTGGCATTCAGCTCCTTTGTGATACTCTGTGA
GTAAGCAGGTGCCCATTGAGCAGAGACAAAGCTCCAAGGAACTGTGCCCTGGTCTAAGGG
CAATCAGCTTGTCATCCATATGCAGGTGAAGAAAAAGAAGGCATTTAGTAGCAGTATATG
CTTCCATGCTTTTTACAAAATGACTCATCTACTGGAAGCATGAATCTGTTTACTGAAATA
CTAATCCCAAGAGATTTTTTTTTTCAAAAAAAGGTGTCTAGTGCTCCAGAAAAGGTACAT
GATAAGCACTTTCTAATAATTAGCAATTCTATTTGGTTTCTCAAGAGAGGCAGAAAGTTG
AAATAAGTAGTACATTTGACAGCCAGTGTTGTTGCAAAAATATATGTGACCTCATTTCCA
GCTAAGTTGAATCCCCATGCTAAAAAGAAAAGAAACAAGCTGTGTGTGTGTGTAATTTTG
GTGCAAAGCAATGTACATATAATCCAGTGGTATGTTGGTAAATGTTTATTAACTGGCTTT
CAAGAAATAAAAACAAATCCCAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-624, gnl|bosTau2|chr1 (9598224-9597621)
               

               
               1-624, gnl|Hg17|chr21 (18569843-18570494)
               

               
               1-624, gnl|Mm7|chr16 (78954905-78955642)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-624, gnl|bosTau2|chr1 (9598224-9597621)
               

               
               1-624, gnl|Hg17|chr21 (18569843-18570494)
               

               
               1-624, gnl|Mm7|chr16 (78954905-78955642)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               mgp (0.230681)
               

               
               spc (0.113366)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mgp (0.230681)
               

               
               spc (0.113366)

	1-624, gnl\|bosTau2\|chr1 (9598224-9597621)
	1-624, gnl\|Hg17\|chr21 (18569843-18570494)
	1-624, gnl\|Mm7\|chr16 (78954905-78955642)