Ss1.1-rspc030_f24.5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGCGCCAGCAGCGAGTCGGAGCTCTATGGAGGTGGCGGCGAGTATCGGGTGGTGGCTGCA GCAGCGACTCCTCTGAGCTGAGCGTTTCAAGCCGGTCCCGACTCCTTCCTCCCCCTTCCC TCCCCCTTTTTTGTTTTCCGTTCCCCTTTCCCCTCCCTTCCCCGTCCCGACGACCGGATC CCGAGGAGGCAGCTGCGGCGGCAGCTGCTGAGTTCTCGGTGAAGGTTTTTCGTTTCTCCC ATCCCCTTCCCTCCCCACCCATCCATTAATATTATTCTTTTGAAGATTCTTCGTTGTCAA GCCGCCAAAGTGGAGAGTGCGATTGCAGAAGGGGGTGCTTCTCGTTTCAGTGCTTCTTCG GGCGGAGGAGGAAGTAGGGGTGCACCTCAGCACTATCCCAAGACTGCTGGCAACAGCGAG TTCCTGGGGAAAACCCCAGGGCAAAACGCTCAGAAATGGATTCCTGCACGAAGCACTAGA CGAGATGACAACTCCGCAGCAAACAACTCCGCAAATGAAAAAGAACGACATGATGCAATC TTCAGGAAAGTAAGAGGCATACTAAATAAGCTTACTCCTGAAAAGTTTGACAAGCTATGC CTTGAGCTCCTCAATGTGGGTGTAGAGTCTAAACTCATCCTTAAAGGGGTCATACTGCTG ATTGTGGACAAAGCCCTAGAAGAGCCAAAGTATAGCTCACTGTATGCTCAGCTATGTCTG CGATTGGCAGAAGATGCACCAAACTTTGATGGCCCAGCAGCAGAGGGTCAGCCAGGACAG AAGCAAAGCACAACATTCAGACGCCTCCTAATTTCCAAATTACAAGATGAATTTGAAAAC CGAACCAGAAATGTTGATGTCTATGATAAGCGTGAAAATCCCCTCCTCCCTGAGGAGGAG GAACAGAGAGCCATTGCTAAGATCAAGATGTTGGGGAACATCAAATTCATTGGAGAACTT GGAAAGCTTGATCTTATTCATGAATCTATCCTTCATAAGTGCATCAAAACACTTTTGGAA AAAAAGAAGAGAGTCCAACTCAAAGATATGGGAGAGGATTTGGAGTGCCTCTGTCAGATA ATGAGGACAGTGGGACCTAGGTTAGACCATGAACGAGCCAAGTCCTTAATGGATCAGTAC TTTGCCAGAATGTGTTCCTTGATGTTAAGTAAGGAATTGCCAGCAAGGATTCGTTTCCTG CTGCAGGATACCGTAGAGTTGCGAGAACATCATTGGGTTCCTCGCAAGGCTTTTCTTGAC AATGGACCAAAGACGATCAATCAAATCCGTCAAGATGCAGTAAAAGATCTAGGAGTGTTT ATTCCTGCTCCTATGGCTCAAGGGATGAGAAGTGACTTCTTTCTGGAGGGACCGTTCATG CCACCCAGGATGAAAATGGATAGGGACCCACTTGGAGGACTTGCTGATATGTTTGGACAA ATGCCAGGTAGCGGAATTGGTACTGGTCCAGGAGTTATCCAGGATAGGTTTTCACCCACC ATGGGGCGTCATCGTTCAAATCAACTCTTCAATGGCCATGGGGGACACATCATGCCTCCC ACACAATCGCAGTTTGGGGAGATGGGAGGCAAGTTTATGAAAAGCCAGGGGCTAAGCCAG CTCTACCATAACCAGAGTCAGGGACTCTTATCCCAGCTGCAAGGACAGTCGAAGGATATG CCACCTCGGTTTTCTAAGAAAGGACAGCTTAATGCAGATGAGATTAGCCTGAGGCCTGCT CAGTCTTTCCTAATGAATAAAAATCAAGTGCCAAAGCTTCAGCCCCAGATAACTATGATC CCTCCTAGTGCACAACCACCACGCACTCAAACACCACCTCTGGGACAGACACCTCAGCTT GGTCTCAAAACTAATCCACCACTAATCCAGGAAAAGCCTGCCAAAACCAGTAAAAAGCCA CCACCATCAAAGGAAGAACTGCTTAAACTAACTGAAACTGTTGTAACTGAATATCTGAAT AGTGGAAATGCAAACGAAGCTGTCAATGGTGTAAGAGAGATGAGGGCTCCTAAACACTTT CTCCCTGAGATGTTAAGCAAAGTAATCATCCTGTCATTAGATAGAAGTGATGAAGATAAA GAAAAAGCCAGTTCTTTGATCAGTTTACTCAAACAGGAAGGGATAGCCACAAGTGACAAC TTCATGCAGGCTTTCCTGAATGTATTGGACCAGTGCCCCAAACTGGAGGTTGACATCCCT TTGGTGAAGTCATATTTAGCACAGTTTGCTGCTCGTGCTATTATTTCAGAGCTGGTGAGC ATTTCAGAACTAGCGCAACCACTGGAAAGTGGCACCCACTTTCCTCTCTTCTTACTTTGT CTTCAGCAATTAGCTAAATTACAAGACCGAGAATGGTTAACAGAGCTTTTCCAACAAAGC AAGGTCAATATGCAGAAAATGCTTCCAGAAATTGATCAGAATAAGGACCGCATGTTGGAG ATCTTGGAAGGAAAGGGACTAAGCTTCTTGTTCCCACTCCTCAAATTGGAGAAGGAACTG TTAAAGCAAATAAAGTTGGATCCATCCCCTCAAACCATATATAAATGGATTAAAGATAAC ATCTCTCCCAAACTTCATGTAGATAAAGGATTTGTGAACATCTTAATGACTAGCTTCTTA CAGTACATTTCTAGTGAAGTAAACCCACCCAGCGATGAAACAGATTCTTCCTCTGCTCCT TCCAAAGAACAGTTAGAGCAGGAAAAACAACTGCTTCTTTCCTTCAAGCCAGTAATGCAG AAGTTCCTTCATGATCATGTTGATCTACAAGTCAGTGCTCTCTATGCTCTTCAGGTGCAC TGCTACAACAGCAACTTCCCAAAAGGCATGTTACTCCGCTTTTTTGTTCACTTCTATGAC ATGGAAATTATTGAGGAAGAAGCTTTCTTGGCTTGGAAAGAAGATATAACCCAAGAGTTT CCTGGGAAAGGCAAGGCTTTGTTCCAGGTGAATCAGTGGCTAACCTGGCTAGAAACTGCT GAAGAAGAAGAATCCGAGGAAGAAGCTGACTAAAAGAACCAGCCAAAGCCTTAAATTGTG CAAAACATACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTC CGCTGTAATGTTTTCACAATATTTAAAGCAGAAGCACGTCAGTTAGGATTTCCTTCTGCA TAAGGTTTTTTTGTAGTGTAATGTCTTAATCATAGTCTACCATCAAATATTTTAGGAGTA TCTTTAATGTTTAGATAGTATATTAGCAGCATGCAATAATTACATCATAAGTTCTCAAGC AGAGGCAGTCTATTGCAAGGACCTTCTTTGCTGCCAGTTATCATAGGCTGTTTTAAGTTA GAAAACTGAATAGCAACACTGAATACTGTAGAAATGCACTTTGCTCAGTAATACTTGAGT TGTTGCAATATTTGATTATCCATTTGGTTGTTACAGAAAAATTCTTAACTGTAATTGATG GTTGTTGCCGTAATAGTATATTGCCTGTATTTCTACCTCTAGTAATGGGCTTTATGTACT AGATTTTAATATCCTTGAGCCTGGGCAAGTGCACAAGTCTTTTTAAAAGAAACATGGTTT ACTTGCACAAAACTGATCAGTTTTGAAAGATCGTAAATGCCCTTGATATGGTTTTTGTGG GTGTGAAACAAATGGTGAGAATTTGAATTGGTCCCTCTTATTATAGTATTGAAATTAAGT CTACTTAATTTATCAAGTCATGTTCATGCCCTGATTTTATATACTTGTATCTATCAATAA ACATTGTGATACTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAATGATAGCTTTTGTTTTGAGGTGGCCTGTCTTAGAAATTTTATAATCAA GATCTTCATGATAAGACAGAAAATTCAAGTTGGTTATTGGATGTAACC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGCGCCAGCAGCGAGTCGGAGCTCTATGGAGGTGGCGGCGAGTATCGGGTGGTGGCTGCA GCAGCGACTCCTCTGAGCTGAGCGTTTCAAGCCGGTCCCGACTCCTTCCTCCCCCTTCCC TCCCCCTTTTTTGTTTTCCGTTCCCCTTTCCCCTCCCTTCCCCGTCCCGACGACCGGATC CCGAGGAGGCAGCTGCGGCGGCAGCTGCTGAGTTCTCGGTGAAGGTTTTTCGTTTCTCCC ATCCCCTTCCCTCCCCACCCATCCATTAATATTATTCTTTTGAAGATTCTTCGTTGTCAA GCCGCCAAAGTGGAGAGTGCGATTGCAGAAGGGGGTGCTTCTCGTTTCAGTGCTTCTTCG GGCGGAGGAGGAAGTAGGGGTGCACCTCAGCACTATCCCAAGACTGCTGGCAACAGCGAG TTCCTGGGGAAAACCCCAGGGCAAAACGCTCAGAAATGGATTCCTGCACGAAGCACTAGA CGAGATGACAACTCCGCAGCAAACAACTCCGCAAATGAAAAAGAACGACATGATGCAATC TTCAGGAAAGTAAGAGGCATACTAAATAAGCTTACTCCTGAAAAGTTTGACAAGCTATGC CTTGAGCTCCTCAATGTGGGTGTAGAGTCTAAACTCATCCTTAAAGGGGTCATACTGCTG ATTGTGGACAAAGCCCTAGAAGAGCCAAAGTATAGCTCACTGTATGCTCAGCTATGTCTG CGATTGGCAGAAGATGCACCAAACTTTGATGGCCCAGCAGCAGAGGGTCAGCCAGGACAG AAGCAAAGCACAACATTCAGACGCCTCCTAATTTCCAAATTACAAGATGAATTTGAAAAC CGAACCAGAAATGTTGATGTCTATGATAAGCGTGAAAATCCCCTCCTCCCTGAGGAGGAG GAACAGAGAGCCATTGCTAAGATCAAGATGTTGGGGAACATCAAATTCATTGGAGAACTT GGAAAGCTTGATCTTATTCATGAATCTATCCTTCATAAGTGCATCAAAACACTTTTGGAA AAAAAGAAGAGAGTCCAACTCAAAGATATGGGAGAGGATTTGGAGTGCCTCTGTCAGATA ATGAGGACAGTGGGACCTAGGTTAGACCATGAACGAGCCAAGTCCTTAATGGATCAGTAC TTTGCCAGAATGTGTTCCTTGATGTTAAGTAAGGAATTGCCAGCAAGGATTCGTTTCCTG CTGCAGGATACCGTAGAGTTGCGAGAACATCATTGGGTTCCTCGCAAGGCTTTTCTTGAC AATGGACCAAAGACGATCAATCAAATCCGTCAAGATGCAGTAAAAGATCTAGGAGTGTTT ATTCCTGCTCCTATGGCTCAAGGGATGAGAAGTGACTTCTTTCTGGAGGGACCGTTCATG CCACCCAGGATGAAAATGGATAGGGACCCACTTGGAGGACTTGCTGATATGTTTGGACAA ATGCCAGGTAGCGGAATTGGTACTGGTCCAGGAGTTATCCAGGATAGGTTTTCACCCACC ATGGGGCGTCATCGTTCAAATCAACTCTTCAATGGCCATGGGGGACACATCATGCCTCCC ACACAATCGCAGTTTGGGGAGATGGGAGGCAAGTTTATGAAAAGCCAGGGGCTAAGCCAG CTCTACCATAACCAGAGTCAGGGACTCTTATCCCAGCTGCAAGGACAGTCGAAGGATATG CCACCTCGGTTTTCTAAGAAAGGACAGCTTAATGCAGATGAGATTAGCCTGAGGCCTGCT CAGTCTTTCCTAATGAATAAAAATCAAGTGCCAAAGCTTCAGCCCCAGATAACTATGATC CCTCCTAGTGCACAACCACCACGCACTCAAACACCACCTCTGGGACAGACACCTCAGCTT GGTCTCAAAACTAATCCACCACTAATCCAGGAAAAGCCTGCCAAAACCAGTAAAAAGCCA CCACCATCAAAGGAAGAACTGCTTAAACTAACTGAAACTGTTGTAACTGAATATCTGAAT AGTGGAAATGCAAACGAAGCTGTCAATGGTGTAAGAGAGATGAGGGCTCCTAAACACTTT CTCCCTGAGATGTTAAGCAAAGTAATCATCCTGTCATTAGATAGAAGTGATGAAGATAAA GAAAAAGCCAGTTCTTTGATCAGTTTACTCAAACAGGAAGGGATAGCCACAAGTGACAAC TTCATGCAGGCTTTCCTGAATGTATTGGACCAGTGCCCCAAACTGGAGGTTGACATCCCT TTGGTGAAGTCATATTTAGCACAGTTTGCTGCTCGTGCTATTATTTCAGAGCTGGTGAGC ATTTCAGAACTAGCGCAACCACTGGAAAGTGGCACCCACTTTCCTCTCTTCTTACTTTGT CTTCAGCAATTAGCTAAATTACAAGACCGAGAATGGTTAACAGAGCTTTTCCAACAAAGC AAGGTCAATATGCAGAAAATGCTTCCAGAAATTGATCAGAATAAGGACCGCATGTTGGAG ATCTTGGAAGGAAAGGGACTAAGCTTCTTGTTCCCACTCCTCAAATTGGAGAAGGAACTG TTAAAGCAAATAAAGTTGGATCCATCCCCTCAAACCATATATAAATGGATTAAAGATAAC ATCTCTCCCAAACTTCATGTAGATAAAGGATTTGTGAACATCTTAATGACTAGCTTCTTA CAGTACATTTCTAGTGAAGTAAACCCACCCAGCGATGAAACAGATTCTTCCTCTGCTCCT TCCAAAGAACAGTTAGAGCAGGAAAAACAACTGCTTCTTTCCTTCAAGCCAGTAATGCAG AAGTTCCTTCATGATCATGTTGATCTACAAGTCAGTGCTCTCTATGCTCTTCAGGTGCAC TGCTACAACAGCAACTTCCCAAAAGGCATGTTACTCCGCTTTTTTGTTCACTTCTATGAC ATGGAAATTATTGAGGAAGAAGCTTTCTTGGCTTGGAAAGAAGATATAACCCAAGAGTTT CCTGGGAAAGGCAAGGCTTTGTTCCAGGTGAATCAGTGGCTAACCTGGCTAGAAACTGCT GAAGAAGAAGAATCCGAGGAAGAAGCTGACTAAAAGAACCAGCCAAAGCCTTAAATTGTG CAAAACATACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTC CGCTGTAATGTTTTCACAATATTTAAAGCAGAAGCACGTCAGTTAGGATTTCCTTCTGCA TAAGGTTTTTTTGTAGTGTAATGTCTTAATCATAGTCTACCATCAAATATTTTAGGAGTA TCTTTAATGTTTAGATAGTATATTAGCAGCATGCAATAATTACATCATAAGTTCTCAAGC AGAGGCAGTCTATTGCAAGGACCTTCTTTGCTGCCAGTTATCATAGGCTGTTTTAAGTTA GAAAACTGAATAGCAACACTGAATACTGTAGAAATGCACTTTGCTCAGTAATACTTGAGT TGTTGCAATATTTGATTATCCATTTGGTTGTTACAGAAAAATTCTTAACTGTAATTGATG GTTGTTGCCGTAATAGTATATTGCCTGTATTTCTACCTCTAGTAATGGGCTTTATGTACT AGATTTTAATATCCTTGAGCCTGGGCAAGTGCACAAGTCTTTTTAAAAGAAACATGGTTT ACTTGCACAAAACTGATCAGTTTTGAAAGATCGTAAATGCCCTTGATATGGTTTTTGTGG GTGTGAAACAAATGGTGAGAATTTGAATTGGTCCCTCTTATTATAGTATTGAAATTAAGT CTACTTAATTTATCAAGTCATGTTCATGCCCTGATTTTATATACTTGTATCTATCAATAA ACATTGTGATACTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAATGATAGCTTTTGTTTTGAGGTGGCCTGTCTTAGAAATTTTATAATCAA GATCTTCATGATAAGACAGAAAATTCAAGTTGGTTATTGGATGTAACC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 9 entry(ies) | More info |
| Predicted RNA structure(s): 9 entry(ies) | Help | Less info |
| Predicted RNA structure(s): 9 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| Aligned organism(s): 141 entry(ies) | More info |
| Aligned organism(s): 141 entry(ies) | Help | Less info |
| 1-226, gnl|bosTau2|chr15 (26781850-26781628) | |
| 1-226, gnl|Hg17|chr11 (10787052-10786826) | |
| 1-226, gnl|Mm7|chr7 (106998535-106998309) | |
| 415-557, gnl|bosTau2|chr15 (26779153-26779011) | |
| 415-557, gnl|canFam2|chr21 (37164490-37164639) | |
| 415-557, gnl|danRer3|chr18 (15773009-15772875) | |
| 415-557, gnl|dasNov1|scaffold_1513 (142085-141936) | |
| 415-557, gnl|echTel1|scaffold_309040 (56591-56442) | |
| 415-557, gnl|fr1|chrUn (37036965-37036832) | |
| 415-557, gnl|galGal2|chr5 (6277263-6277129) | |
| 415-557, gnl|hg17|chr11 (10784024-10784173) | |
| 415-557, gnl|Hg17|chr11 (10784172-10784030) | |
| 415-557, gnl|mm7|chr7 (106995702-106995851) | |
| 415-557, gnl|Mm7|chr7 (106995850-106995708) | |
| 415-557, gnl|monDom2|scaffold_10 (61112440-61112589) | |
| 415-557, gnl|oryCun1|scaffold_199582 (95660-95809) | |
| 415-557, gnl|panTro1|chr9 (11020773-11020922) | |
| 415-557, gnl|rheMac2|chr14 (61137844-61137696) | |
| 415-557, gnl|rn3|chr1 (168949521-168949670) | |
| 415-557, gnl|tetNig1|chr5 (6282807-6282673) | |
| 415-557, gnl|xenTro1|scaffold_621 (137636-137799) | |
| 655-792, gnl|bosTau2|chr15 (26777748-26777611) | |
| 655-792, gnl|canFam2|chr21 (37162831-37163133) | |
| 655-792, gnl|danRer3|chr18 (15773942-15773602) | |
| 655-792, gnl|dasNov1|scaffold_1513 (143624-143322) | |
| 655-792, gnl|echTel1|scaffold_309040 (58205-57896) | |
| 655-792, gnl|fr1|chrUn (37037580-37037268) | |
| 655-792, gnl|galGal2|chr5 (6278705-6278399) | |
| 655-792, gnl|hg17|chr11 (10782252-10782552) | |
| 655-792, gnl|Hg17|chr11 (10782547-10782410) | |
| 655-792, gnl|mm7|chr7 (106993790-106994088) | |
| 655-792, gnl|Mm7|chr7 (106994085-106993948) | |
| 655-792, gnl|monDom2|scaffold_10 (61110826-61111154) | |
| 655-792, gnl|oryCun1|scaffold_199582 (93964-94271) | |
| 655-792, gnl|panTro1|chr9 (11018992-11019292) | |
| 655-792, gnl|rheMac2|chr14 (61139527-61139229) | |
| 655-792, gnl|rn3|chr1 (168947804-168948111) | |
| 655-792, gnl|tetNig1|chr5 (6283393-6283100) | |
| 655-792, gnl|xenTro1|scaffold_621 (136200-136538) | |
| 859-1011, gnl|bosTau2|chr15 (26776890-26776738) | |
| 859-1011, gnl|canFam2|chr21 (37162583-37162807) | |
| 859-1011, gnl|danRer3|chr18 (15774217-15773965) | |
| 859-1011, gnl|dasNov1|scaffold_1513 (143882-143650) | |
| 859-1011, gnl|echTel1|scaffold_309040 (58634-58409) | |
| 859-1011, gnl|fr1|chrUn (37037834-37037599) | |
| 859-1011, gnl|galGal2|chr5 (6278956-6278730) | |
| 859-1011, gnl|hg17|chr11 (10781999-10782228) | |
| 859-1011, gnl|Hg17|chr11 (10782174-10782022) | |
| 859-1011, gnl|mm7|chr7 (106993534-106993747) | |
| 859-1011, gnl|Mm7|chr7 (106993703-106993551) | |
| 859-1011, gnl|monDom2|scaffold_10 (61110555-61110778) | |
| 859-1011, gnl|oryCun1|scaffold_199582 (93703-93943) | |
| 859-1011, gnl|panTro1|chr9 (11018739-11018968) | |
| 859-1011, gnl|rheMac2|chr14 (61139780-61139551) | |
| 859-1011, gnl|rn3|chr1 (168947503-168947744) | |
| 859-1011, gnl|tetNig1|chr5 (6283644-6283406) | |
| 859-1011, gnl|xenTro1|scaffold_621 (135959-136175) | |
| 1012-1122, gnl|bosTau2|chr15 (26776372-26776262) | |
| 1012-1122, gnl|canFam2|chr21 (37162137-37162283) | |
| 1012-1122, gnl|danRer3|chr18 (15774389-15774250) | |
| 1012-1122, gnl|dasNov1|scaffold_1513 (144354-144213) | |
| 1012-1122, gnl|echTel1|scaffold_309040 (59004-58867) | |
| 1012-1122, gnl|fr1|chrUn (37038012-37037886) | |
| 1012-1122, gnl|galGal2|chr5 (6279461-6279306) | |
| 1012-1122, gnl|hg17|chr11 (10781600-10781740) | |
| 1012-1122, gnl|Hg17|chr11 (10781713-10781603) | |
| 1012-1122, gnl|loxAfr1|scaffold_3868 (59706-59851) | |
| 1012-1122, gnl|mm7|chr7 (106993160-106993293) | |
| 1012-1122, gnl|Mm7|chr7 (106993273-106993163) | |
| 1012-1122, gnl|monDom2|scaffold_10 (61110145-61110290) | |
| 1012-1122, gnl|oryCun1|scaffold_199582 (93283-93425) | |
| 1012-1122, gnl|panTro1|chr9 (11018344-11018484) | |
| 1012-1122, gnl|rheMac2|chr14 (61140186-61140045) | |
| 1012-1122, gnl|rn3|chr1 (168947084-168947216) | |
| 1012-1122, gnl|tetNig1|chr5 (6283822-6283698) | |
| 1012-1122, gnl|xenTro1|scaffold_621 (135422-135556) | |
| 1205-1306, gnl|bosTau2|chr15 (26775935-26775834) | |
| 1205-1306, gnl|canFam2|chr21 (37161685-37161790) | |
| 1205-1306, gnl|danRer3|chr18 (15775202-15775100) | |
| 1205-1306, gnl|dasNov1|scaffold_1513 (144816-144711) | |
| 1205-1306, gnl|echTel1|scaffold_309040 (59424-59319) | |
| 1205-1306, gnl|fr1|chrUn (37038275-37038173) | |
| 1205-1306, gnl|galGal2|chr5 (6280055-6279950) | |
| 1205-1306, gnl|hg17|chr11 (10781149-10781254) | |
| 1205-1306, gnl|Hg17|chr11 (10781253-10781152) | |
| 1205-1306, gnl|loxAfr1|scaffold_3868 (59238-59343) | |
| 1205-1306, gnl|mm7|chr7 (106992747-106992852) | |
| 1205-1306, gnl|Mm7|chr7 (106992851-106992750) | |
| 1205-1306, gnl|monDom2|scaffold_10 (61109680-61109785) | |
| 1205-1306, gnl|oryCun1|scaffold_199582 (92907-93012) | |
| 1205-1306, gnl|panTro1|chr9 (11017893-11017998) | |
| 1205-1306, gnl|rheMac2|chr14 (61140632-61140527) | |
| 1205-1306, gnl|rn3|chr1 (168946137-168946242) | |
| 1205-1306, gnl|tetNig1|chr5 (6284084-6283982) | |
| 1205-1306, gnl|xenTro1|scaffold_621 (134988-135093) | |
| 1446-1609, gnl|bosTau2|chr15 (26775167-26775004) | |
| 1446-1609, gnl|canFam2|chr21 (37160973-37161157) | |
| 1446-1609, gnl|danRer3|chr18 (15775662-15775534) | |
| 1446-1609, gnl|dasNov1|scaffold_1513 (145482-145298) | |
| 1446-1609, gnl|echTel1|scaffold_309040 (60053-59877) | |
| 1446-1609, gnl|fr1|chrUn (37038755-37038575) | |
| 1446-1609, gnl|galGal2|chr5 (6280700-6280515) | |
| 1446-1609, gnl|hg17|chr11 (10780161-10780344) | |
| 1446-1609, gnl|Hg17|chr11 (10780334-10780171) | |
| 1446-1609, gnl|loxAfr1|scaffold_3868 (58493-58677) | |
| 1446-1609, gnl|mm7|chr7 (106992213-106992394) | |
| 1446-1609, gnl|Mm7|chr7 (106992384-106992221) | |
| 1446-1609, gnl|monDom2|scaffold_10 (61108970-61109154) | |
| 1446-1609, gnl|oryCun1|scaffold_199582 (92259-92443) | |
| 1446-1609, gnl|panTro1|chr9 (11016897-11017080) | |
| 1446-1609, gnl|rheMac2|chr14 (61141622-61141439) | |
| 1446-1609, gnl|rn3|chr1 (168945610-168945791) | |
| 1446-1609, gnl|tetNig1|chr5 (6284573-6284388) | |
| 1446-1609, gnl|xenTro1|scaffold_621 (134433-134618) | |
| 1721-1848, gnl|bosTau2|chr15 (26773911-26773784) | |
| 1721-1848, gnl|Hg17|chr11 (10779212-10779085) | |
| 1721-1848, gnl|Mm7|chr7 (106991240-106991113) | |
| 2167-2428, gnl|bosTau2|chr15 (26773137-26772876) | |
| 2167-2428, gnl|canFam2|chr21 (37158982-37159258) | |
| 2167-2428, gnl|danRer3|chr18 (15777197-15776913) | |
| 2167-2428, gnl|dasNov1|scaffold_1513 (147520-147244) | |
| 2167-2428, gnl|echTel1|scaffold_309040 (62219-61943) | |
| 2167-2428, gnl|fr1|chrUn (37039974-37039685) | |
| 2167-2428, gnl|galGal2|chr5 (6283380-6283104) | |
| 2167-2428, gnl|hg17|chr11 (10778209-10778485) | |
| 2167-2428, gnl|Hg17|chr11 (10778475-10778213) | |
| 2167-2428, gnl|loxAfr1|scaffold_3868 (56210-56486) | |
| 2167-2428, gnl|mm7|chr7 (106990202-106990478) | |
| 2167-2428, gnl|Mm7|chr7 (106990470-106990206) | |
| 2167-2428, gnl|monDom2|scaffold_10 (61106842-61107119) | |
| 2167-2428, gnl|oryCun1|scaffold_199582 (90302-90578) | |
| 2167-2428, gnl|panTro1|chr9 (11014860-11015141) | |
| 2167-2428, gnl|rheMac2|chr14 (61143687-61143411) | |
| 2167-2428, gnl|rn3|chr1 (168943737-168944013) | |
| 2167-2428, gnl|tetNig1|chr5 (6285817-6285528) | |
| 2167-2428, gnl|xenTro1|scaffold_621 (131563-131839) | |
| 2612-3638, gnl|bosTau2|chr15 (28462755-28461727) | |
| 2612-3638, gnl|Mm7|chr7 (106989792-106987616) | |
| 3691-3805, gnl|bosTau2|chr2 (39754073-39753960) | |
| 3691-3805, gnl|Hg17|chr11 (10775282-10775177) | |
| 3691-3805, gnl|Mm7|chr7 (106987563-106987458) |
| Aligned organism(s): 141 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-226, gnl|bosTau2|chr15 (26781850-26781628) | |
| 1-226, gnl|Hg17|chr11 (10787052-10786826) | |
| 1-226, gnl|Mm7|chr7 (106998535-106998309) | |
| 415-557, gnl|bosTau2|chr15 (26779153-26779011) | |
| 415-557, gnl|canFam2|chr21 (37164490-37164639) | |
| 415-557, gnl|danRer3|chr18 (15773009-15772875) | |
| 415-557, gnl|dasNov1|scaffold_1513 (142085-141936) | |
| 415-557, gnl|echTel1|scaffold_309040 (56591-56442) | |
| 415-557, gnl|fr1|chrUn (37036965-37036832) | |
| 415-557, gnl|galGal2|chr5 (6277263-6277129) | |
| 415-557, gnl|hg17|chr11 (10784024-10784173) | |
| 415-557, gnl|Hg17|chr11 (10784172-10784030) | |
| 415-557, gnl|mm7|chr7 (106995702-106995851) | |
| 415-557, gnl|Mm7|chr7 (106995850-106995708) | |
| 415-557, gnl|monDom2|scaffold_10 (61112440-61112589) | |
| 415-557, gnl|oryCun1|scaffold_199582 (95660-95809) | |
| 415-557, gnl|panTro1|chr9 (11020773-11020922) | |
| 415-557, gnl|rheMac2|chr14 (61137844-61137696) | |
| 415-557, gnl|rn3|chr1 (168949521-168949670) | |
| 415-557, gnl|tetNig1|chr5 (6282807-6282673) | |
| 415-557, gnl|xenTro1|scaffold_621 (137636-137799) | |
| 655-792, gnl|bosTau2|chr15 (26777748-26777611) | |
| 655-792, gnl|canFam2|chr21 (37162831-37163133) | |
| 655-792, gnl|danRer3|chr18 (15773942-15773602) | |
| 655-792, gnl|dasNov1|scaffold_1513 (143624-143322) | |
| 655-792, gnl|echTel1|scaffold_309040 (58205-57896) | |
| 655-792, gnl|fr1|chrUn (37037580-37037268) | |
| 655-792, gnl|galGal2|chr5 (6278705-6278399) | |
| 655-792, gnl|hg17|chr11 (10782252-10782552) | |
| 655-792, gnl|Hg17|chr11 (10782547-10782410) | |
| 655-792, gnl|mm7|chr7 (106993790-106994088) | |
| 655-792, gnl|Mm7|chr7 (106994085-106993948) | |
| 655-792, gnl|monDom2|scaffold_10 (61110826-61111154) | |
| 655-792, gnl|oryCun1|scaffold_199582 (93964-94271) | |
| 655-792, gnl|panTro1|chr9 (11018992-11019292) | |
| 655-792, gnl|rheMac2|chr14 (61139527-61139229) | |
| 655-792, gnl|rn3|chr1 (168947804-168948111) | |
| 655-792, gnl|tetNig1|chr5 (6283393-6283100) | |
| 655-792, gnl|xenTro1|scaffold_621 (136200-136538) | |
| 859-1011, gnl|bosTau2|chr15 (26776890-26776738) | |
| 859-1011, gnl|canFam2|chr21 (37162583-37162807) | |
| 859-1011, gnl|danRer3|chr18 (15774217-15773965) | |
| 859-1011, gnl|dasNov1|scaffold_1513 (143882-143650) | |
| 859-1011, gnl|echTel1|scaffold_309040 (58634-58409) | |
| 859-1011, gnl|fr1|chrUn (37037834-37037599) | |
| 859-1011, gnl|galGal2|chr5 (6278956-6278730) | |
| 859-1011, gnl|hg17|chr11 (10781999-10782228) | |
| 859-1011, gnl|Hg17|chr11 (10782174-10782022) | |
| 859-1011, gnl|mm7|chr7 (106993534-106993747) | |
| 859-1011, gnl|Mm7|chr7 (106993703-106993551) | |
| 859-1011, gnl|monDom2|scaffold_10 (61110555-61110778) | |
| 859-1011, gnl|oryCun1|scaffold_199582 (93703-93943) | |
| 859-1011, gnl|panTro1|chr9 (11018739-11018968) | |
| 859-1011, gnl|rheMac2|chr14 (61139780-61139551) | |
| 859-1011, gnl|rn3|chr1 (168947503-168947744) | |
| 859-1011, gnl|tetNig1|chr5 (6283644-6283406) | |
| 859-1011, gnl|xenTro1|scaffold_621 (135959-136175) | |
| 1012-1122, gnl|bosTau2|chr15 (26776372-26776262) | |
| 1012-1122, gnl|canFam2|chr21 (37162137-37162283) | |
| 1012-1122, gnl|danRer3|chr18 (15774389-15774250) | |
| 1012-1122, gnl|dasNov1|scaffold_1513 (144354-144213) | |
| 1012-1122, gnl|echTel1|scaffold_309040 (59004-58867) | |
| 1012-1122, gnl|fr1|chrUn (37038012-37037886) | |
| 1012-1122, gnl|galGal2|chr5 (6279461-6279306) | |
| 1012-1122, gnl|hg17|chr11 (10781600-10781740) | |
| 1012-1122, gnl|Hg17|chr11 (10781713-10781603) | |
| 1012-1122, gnl|loxAfr1|scaffold_3868 (59706-59851) | |
| 1012-1122, gnl|mm7|chr7 (106993160-106993293) | |
| 1012-1122, gnl|Mm7|chr7 (106993273-106993163) | |
| 1012-1122, gnl|monDom2|scaffold_10 (61110145-61110290) | |
| 1012-1122, gnl|oryCun1|scaffold_199582 (93283-93425) | |
| 1012-1122, gnl|panTro1|chr9 (11018344-11018484) | |
| 1012-1122, gnl|rheMac2|chr14 (61140186-61140045) | |
| 1012-1122, gnl|rn3|chr1 (168947084-168947216) | |
| 1012-1122, gnl|tetNig1|chr5 (6283822-6283698) | |
| 1012-1122, gnl|xenTro1|scaffold_621 (135422-135556) | |
| 1205-1306, gnl|bosTau2|chr15 (26775935-26775834) | |
| 1205-1306, gnl|canFam2|chr21 (37161685-37161790) | |
| 1205-1306, gnl|danRer3|chr18 (15775202-15775100) | |
| 1205-1306, gnl|dasNov1|scaffold_1513 (144816-144711) | |
| 1205-1306, gnl|echTel1|scaffold_309040 (59424-59319) | |
| 1205-1306, gnl|fr1|chrUn (37038275-37038173) | |
| 1205-1306, gnl|galGal2|chr5 (6280055-6279950) | |
| 1205-1306, gnl|hg17|chr11 (10781149-10781254) | |
| 1205-1306, gnl|Hg17|chr11 (10781253-10781152) | |
| 1205-1306, gnl|loxAfr1|scaffold_3868 (59238-59343) | |
| 1205-1306, gnl|mm7|chr7 (106992747-106992852) | |
| 1205-1306, gnl|Mm7|chr7 (106992851-106992750) | |
| 1205-1306, gnl|monDom2|scaffold_10 (61109680-61109785) | |
| 1205-1306, gnl|oryCun1|scaffold_199582 (92907-93012) | |
| 1205-1306, gnl|panTro1|chr9 (11017893-11017998) | |
| 1205-1306, gnl|rheMac2|chr14 (61140632-61140527) | |
| 1205-1306, gnl|rn3|chr1 (168946137-168946242) | |
| 1205-1306, gnl|tetNig1|chr5 (6284084-6283982) | |
| 1205-1306, gnl|xenTro1|scaffold_621 (134988-135093) | |
| 1446-1609, gnl|bosTau2|chr15 (26775167-26775004) | |
| 1446-1609, gnl|canFam2|chr21 (37160973-37161157) | |
| 1446-1609, gnl|danRer3|chr18 (15775662-15775534) | |
| 1446-1609, gnl|dasNov1|scaffold_1513 (145482-145298) | |
| 1446-1609, gnl|echTel1|scaffold_309040 (60053-59877) | |
| 1446-1609, gnl|fr1|chrUn (37038755-37038575) | |
| 1446-1609, gnl|galGal2|chr5 (6280700-6280515) | |
| 1446-1609, gnl|hg17|chr11 (10780161-10780344) | |
| 1446-1609, gnl|Hg17|chr11 (10780334-10780171) | |
| 1446-1609, gnl|loxAfr1|scaffold_3868 (58493-58677) | |
| 1446-1609, gnl|mm7|chr7 (106992213-106992394) | |
| 1446-1609, gnl|Mm7|chr7 (106992384-106992221) | |
| 1446-1609, gnl|monDom2|scaffold_10 (61108970-61109154) | |
| 1446-1609, gnl|oryCun1|scaffold_199582 (92259-92443) | |
| 1446-1609, gnl|panTro1|chr9 (11016897-11017080) | |
| 1446-1609, gnl|rheMac2|chr14 (61141622-61141439) | |
| 1446-1609, gnl|rn3|chr1 (168945610-168945791) | |
| 1446-1609, gnl|tetNig1|chr5 (6284573-6284388) | |
| 1446-1609, gnl|xenTro1|scaffold_621 (134433-134618) | |
| 1721-1848, gnl|bosTau2|chr15 (26773911-26773784) | |
| 1721-1848, gnl|Hg17|chr11 (10779212-10779085) | |
| 1721-1848, gnl|Mm7|chr7 (106991240-106991113) | |
| 2167-2428, gnl|bosTau2|chr15 (26773137-26772876) | |
| 2167-2428, gnl|canFam2|chr21 (37158982-37159258) | |
| 2167-2428, gnl|danRer3|chr18 (15777197-15776913) | |
| 2167-2428, gnl|dasNov1|scaffold_1513 (147520-147244) | |
| 2167-2428, gnl|echTel1|scaffold_309040 (62219-61943) | |
| 2167-2428, gnl|fr1|chrUn (37039974-37039685) | |
| 2167-2428, gnl|galGal2|chr5 (6283380-6283104) | |
| 2167-2428, gnl|hg17|chr11 (10778209-10778485) | |
| 2167-2428, gnl|Hg17|chr11 (10778475-10778213) | |
| 2167-2428, gnl|loxAfr1|scaffold_3868 (56210-56486) | |
| 2167-2428, gnl|mm7|chr7 (106990202-106990478) | |
| 2167-2428, gnl|Mm7|chr7 (106990470-106990206) | |
| 2167-2428, gnl|monDom2|scaffold_10 (61106842-61107119) | |
| 2167-2428, gnl|oryCun1|scaffold_199582 (90302-90578) | |
| 2167-2428, gnl|panTro1|chr9 (11014860-11015141) | |
| 2167-2428, gnl|rheMac2|chr14 (61143687-61143411) | |
| 2167-2428, gnl|rn3|chr1 (168943737-168944013) | |
| 2167-2428, gnl|tetNig1|chr5 (6285817-6285528) | |
| 2167-2428, gnl|xenTro1|scaffold_621 (131563-131839) | |
| 2612-3638, gnl|bosTau2|chr15 (28462755-28461727) | |
| 2612-3638, gnl|Mm7|chr7 (106989792-106987616) | |
| 3691-3805, gnl|bosTau2|chr2 (39754073-39753960) | |
| 3691-3805, gnl|Hg17|chr11 (10775282-10775177) | |
| 3691-3805, gnl|Mm7|chr7 (106987563-106987458) |
| Expressed library(ies): 78 entry(ies) | More info |
| Expressed library(ies): 78 entry(ies) | Help | Less info |
| tbr (5.39624) | |
| ste (2.97458) | |
| sin (2.97411) | |
| liv (2.92569) | |
| clu (2.75185) | |
| tra (2.46184) | |
| sme (2.44349) | |
| ret (2.05973) | |
| ldo (2.03706) | |
| fat (1.91656) | |
| sug (1.90937) | |
| lin (1.74723) | |
| spl (1.71821) | |
| ova (1.67872) | |
| ece (1.60514) | |
| kid (1.42709) | |
| bla (1.36782) | |
| isp (1.35338) | |
| ecc (1.26539) | |
| mgm (1.2624) | |
| tes (1.24688) | |
| cbr (1.15178) | |
| mga (1.12144) | |
| cty (1.0408) | |
| vin (0.997672) | |
| ssp (0.948638) | |
| thg (0.887536) | |
| ski (0.880411) | |
| rec (0.865351) | |
| fcc (0.791139) | |
| eru (0.720288) | |
| fty (0.703359) | |
| mgp (0.692042) | |
| cbl (0.688784) | |
| ese (0.632511) | |
| bfe (0.599431) | |
| ebs (0.591506) | |
| med (0.58126) | |
| csk (0.562984) | |
| sag (0.548145) | |
| gul (0.532765) | |
| pro (0.512033) | |
| eye (0.511509) | |
| jej (0.494609) | |
| pgl (0.473934) | |
| jca (0.45584) | |
| lun (0.451467) | |
| hyp (0.42851) | |
| pty (0.428143) | |
| nbm (0.397298) | |
| aor (0.390549) | |
| col (0.390016) | |
| elu (0.385356) | |
| nep (0.36785) | |
| fbs (0.350693) | |
| duo (0.345602) | |
| nco (0.323468) | |
| fco (0.314416) | |
| ctl (0.306138) | |
| eje (0.296501) | |
| cte (0.29274) | |
| lnt (0.284616) | |
| cga (0.279096) | |
| hlv (0.278513) | |
| nca (0.273748) | |
| ute (0.265569) | |
| cbe (0.239234) | |
| pan (0.23596) | |
| spc (0.226732) | |
| ill (0.175593) | |
| ton (0.1755) | |
| mcp (0.170648) | |
| fhi (0.169578) | |
| eli (0.151814) | |
| che (0.136314) | |
| pla (0.133672) | |
| lyg (0.133103) | |
| nmm (0.132802) |
| Expressed library(ies): 78 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tbr (5.39624) | |
| ste (2.97458) | |
| sin (2.97411) | |
| liv (2.92569) | |
| clu (2.75185) | |
| tra (2.46184) | |
| sme (2.44349) | |
| ret (2.05973) | |
| ldo (2.03706) | |
| fat (1.91656) | |
| sug (1.90937) | |
| lin (1.74723) | |
| spl (1.71821) | |
| ova (1.67872) | |
| ece (1.60514) | |
| kid (1.42709) | |
| bla (1.36782) | |
| isp (1.35338) | |
| ecc (1.26539) | |
| mgm (1.2624) | |
| tes (1.24688) | |
| cbr (1.15178) | |
| mga (1.12144) | |
| cty (1.0408) | |
| vin (0.997672) | |
| ssp (0.948638) | |
| thg (0.887536) | |
| ski (0.880411) | |
| rec (0.865351) | |
| fcc (0.791139) | |
| eru (0.720288) | |
| fty (0.703359) | |
| mgp (0.692042) | |
| cbl (0.688784) | |
| ese (0.632511) | |
| bfe (0.599431) | |
| ebs (0.591506) | |
| med (0.58126) | |
| csk (0.562984) | |
| sag (0.548145) | |
| gul (0.532765) | |
| pro (0.512033) | |
| eye (0.511509) | |
| jej (0.494609) | |
| pgl (0.473934) | |
| jca (0.45584) | |
| lun (0.451467) | |
| hyp (0.42851) | |
| pty (0.428143) | |
| nbm (0.397298) | |
| aor (0.390549) | |
| col (0.390016) | |
| elu (0.385356) | |
| nep (0.36785) | |
| fbs (0.350693) | |
| duo (0.345602) | |
| nco (0.323468) | |
| fco (0.314416) | |
| ctl (0.306138) | |
| eje (0.296501) | |
| cte (0.29274) | |
| lnt (0.284616) | |
| cga (0.279096) | |
| hlv (0.278513) | |
| nca (0.273748) | |
| ute (0.265569) | |
| cbe (0.239234) | |
| pan (0.23596) | |
| spc (0.226732) | |
| ill (0.175593) | |
| ton (0.1755) | |
| mcp (0.170648) | |
| fhi (0.169578) | |
| eli (0.151814) | |
| che (0.136314) | |
| pla (0.133672) | |
| lyg (0.133103) | |
| nmm (0.132802) |