Ss1.1-rspc031_b21.5
|
GCTGGTTGCCAGCTGCCGCTCGGAGTTTGGTTACGCAATTTGTTGCCGCAGCTGCTGCCG
CGGCCGAAGCCACCTCAGTGAGGAGCGAATTTGCCGCGAGGTTCCCATCTCGGAAAGAGG
CTCTCCTCGTTGCTGGCCAAGTGCCAGAGAACCTGTGCACCTGTCTCCCCATCAATACCC
AACGATGGGCAACTCCTGCTTCGGCCTCAAGGAACGCCTGATGAAGCGGCTTCGGCCTCT
GCCTACGGTGATCGTCATCCGTACCTGCCTGCCCCAGCGAAGGAGCCGAGATTTCCGCGT
GGTGGTCCTGGGCTCGGCCGGCGTGGGCAAGAGCGCGCTGGTGCAGAGGTGGGTGCGCGG
CAACTTCCGTGAGGCGTATCTGCCGACTATCGAAGATACCTACCGCCAGGTGCTGGGCTG
CAGCCACAAGGTGGGCGCGCTGCACATCACCGACACCACCGGTGGCCGCCGCTACCGGGG
CCTGCAGCGCCTTGCCATTGCCAGGGGTCACGCCTTCATCCTGGTCTACTCCGTCACCAA
GAAGCACACCCTGGAGGAGCTGAAGCCCCTGTACCATCTGATCCGCGAGCTCAAAGGTAA
CAACCCGCTGAAGTGCCCGATCATCCTGGTGGGCAACAAGTGCGACGAGAGCCACCGGGA
GGTGAGTGAGAAGGAAGGGGCTGCCTGCGCGTCCGAGTGGAATTGCGCCTTCTTGGAGAC
CTCTGCCAAGATGAATATCAACGTGCAGGAGCTGTTCCAGATGCTGCTGAACCACGAGAA
GAAACCCGCCGCCAGCGCCCAGCCCGCGCAGAAGAAATCCCAGATCCCCAAGACCGCCGA
GAAGCTGCTGGGCAAGTGCATCATCATGTGAGCCCTGGGTCTTAGGAGCGCGACCTTCTC
CTTCAGTGTGCCGAAATCATGGACCGACCCCATTGTGATGTGTCACCTGTACATGACTGA
CTTCTGTGCTGTGGTTTGATTGTAACAATTAGATGTCAATAAATGTCCCTTGTGAGTTAA
TACCTTTTCTTTTTCCCAGACAGGAGAATTCAAATTGTTAAAATATGGACATTGGAGGAG
GAGAGGGAAATATGGACTTTGGAAGCATTTAAAAGATAGGACTTGGACAGACTTTAGAGA
TGAATGTTTGAAAAAGAGAATGAAACAGCAAAATGAATTGAAAGACGCCACTGCCCTTCT
TGTGATCCTATTATTGTGTATTATTCTTAAACAGTTCAAGTCTTGTAAATGTCTGATCAT
ATCTTCCCATTGTGTATTTAATTGTTAAGAAACATGTTTTTGCAACAAAAGCTTTGACAA
ATGACTGTGAGACAGAGATACATGATAAATAAATGAATATTCTATAGCTGAGCATTGAGG
GTGGGAGCAGAGAAAATTGTGAAAATGGAAATTGCTTACTAAATATATGCTGATTGTTTC
CTAAGTCATTTAAAAATGTTTGAGTATTCTACATAGCAGTTTAAAAAAATTATAACAATT
CAATGACTTAATAAAGCTTTTCCTGCATGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCTGGTTGCCAGCTGCCGCTCGGAGTTTGGTTACGCAATTTGTTGCCGCAGCTGCTGCCG
CGGCCGAAGCCACCTCAGTGAGGAGCGAATTTGCCGCGAGGTTCCCATCTCGGAAAGAGG
CTCTCCTCGTTGCTGGCCAAGTGCCAGAGAACCTGTGCACCTGTCTCCCCATCAATACCC
AACGATGGGCAACTCCTGCTTCGGCCTCAAGGAACGCCTGATGAAGCGGCTTCGGCCTCT
GCCTACGGTGATCGTCATCCGTACCTGCCTGCCCCAGCGAAGGAGCCGAGATTTCCGCGT
GGTGGTCCTGGGCTCGGCCGGCGTGGGCAAGAGCGCGCTGGTGCAGAGGTGGGTGCGCGG
CAACTTCCGTGAGGCGTATCTGCCGACTATCGAAGATACCTACCGCCAGGTGCTGGGCTG
CAGCCACAAGGTGGGCGCGCTGCACATCACCGACACCACCGGTGGCCGCCGCTACCGGGG
CCTGCAGCGCCTTGCCATTGCCAGGGGTCACGCCTTCATCCTGGTCTACTCCGTCACCAA
GAAGCACACCCTGGAGGAGCTGAAGCCCCTGTACCATCTGATCCGCGAGCTCAAAGGTAA
CAACCCGCTGAAGTGCCCGATCATCCTGGTGGGCAACAAGTGCGACGAGAGCCACCGGGA
GGTGAGTGAGAAGGAAGGGGCTGCCTGCGCGTCCGAGTGGAATTGCGCCTTCTTGGAGAC
CTCTGCCAAGATGAATATCAACGTGCAGGAGCTGTTCCAGATGCTGCTGAACCACGAGAA
GAAACCCGCCGCCAGCGCCCAGCCCGCGCAGAAGAAATCCCAGATCCCCAAGACCGCCGA
GAAGCTGCTGGGCAAGTGCATCATCATGTGAGCCCTGGGTCTTAGGAGCGCGACCTTCTC
CTTCAGTGTGCCGAAATCATGGACCGACCCCATTGTGATGTGTCACCTGTACATGACTGA
CTTCTGTGCTGTGGTTTGATTGTAACAATTAGATGTCAATAAATGTCCCTTGTGAGTTAA
TACCTTTTCTTTTTCCCAGACAGGAGAATTCAAATTGTTAAAATATGGACATTGGAGGAG
GAGAGGGAAATATGGACTTTGGAAGCATTTAAAAGATAGGACTTGGACAGACTTTAGAGA
TGAATGTTTGAAAAAGAGAATGAAACAGCAAAATGAATTGAAAGACGCCACTGCCCTTCT
TGTGATCCTATTATTGTGTATTATTCTTAAACAGTTCAAGTCTTGTAAATGTCTGATCAT
ATCTTCCCATTGTGTATTTAATTGTTAAGAAACATGTTTTTGCAACAAAAGCTTTGACAA
ATGACTGTGAGACAGAGATACATGATAAATAAATGAATATTCTATAGCTGAGCATTGAGG
GTGGGAGCAGAGAAAATTGTGAAAATGGAAATTGCTTACTAAATATATGCTGATTGTTTC
CTAAGTCATTTAAAAATGTTTGAGTATTCTACATAGCAGTTTAAAAAAATTATAACAATT
CAATGACTTAATAAAGCTTTTCCTGCATGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA
|
|
gi|61888054|ref|XP_580701.1| |
Protein identifier
|
gi|61888054|ref|XP_580701.1| |
|
283-779, gnl|bosTau2|chr7 (17736478-17736971) |
|
283-779, gnl|canFam2|chr20 (59615056-59614445) |
|
283-779, gnl|danRer3|chr15 (5161157-5160569) |
|
283-779, gnl|dasNov1|scaffold_13108 (20433-21046) |
|
283-779, gnl|echTel1|scaffold_87313 (1490-885) |
|
283-779, gnl|fr1|chrUn (284568005-284567320) |
|
283-779, gnl|galGal2|chrUn (59891849-59892451) |
|
283-779, gnl|hg17|chr19 (2668203-2668814) |
|
283-779, gnl|Hg17|chr19 (2668793-2668300) |
|
283-779, gnl|loxAfr1|scaffold_69023 (7480-8085) |
|
283-779, gnl|mm7|chr10 (80813809-80814420) |
|
283-779, gnl|Mm7|chr10 (80814399-80813906) |
|
283-779, gnl|monDom2|scaffold_75 (5287125-5287734) |
|
283-779, gnl|oryCun1|scaffold_179803 (136713-137325) |
|
283-779, gnl|panTro1|chr20 (2794141-2794752) |
|
283-779, gnl|rheMac2|chr19 (2547331-2547942) |
|
283-779, gnl|rn3|chr7 (10175392-10174781) |
|
283-779, gnl|tetNig1|chr10 (8731104-8731780) |
|
283-779, gnl|xenTro1|scaffold_868 (332522-331919) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
283-779, gnl|bosTau2|chr7 (17736478-17736971) |
|
283-779, gnl|canFam2|chr20 (59615056-59614445) |
|
283-779, gnl|danRer3|chr15 (5161157-5160569) |
|
283-779, gnl|dasNov1|scaffold_13108 (20433-21046) |
|
283-779, gnl|echTel1|scaffold_87313 (1490-885) |
|
283-779, gnl|fr1|chrUn (284568005-284567320) |
|
283-779, gnl|galGal2|chrUn (59891849-59892451) |
|
283-779, gnl|hg17|chr19 (2668203-2668814) |
|
283-779, gnl|Hg17|chr19 (2668793-2668300) |
|
283-779, gnl|loxAfr1|scaffold_69023 (7480-8085) |
|
283-779, gnl|mm7|chr10 (80813809-80814420) |
|
283-779, gnl|Mm7|chr10 (80814399-80813906) |
|
283-779, gnl|monDom2|scaffold_75 (5287125-5287734) |
|
283-779, gnl|oryCun1|scaffold_179803 (136713-137325) |
|
283-779, gnl|panTro1|chr20 (2794141-2794752) |
|
283-779, gnl|rheMac2|chr19 (2547331-2547942) |
|
283-779, gnl|rn3|chr7 (10175392-10174781) |
|
283-779, gnl|tetNig1|chr10 (8731104-8731780) |
|
283-779, gnl|xenTro1|scaffold_868 (332522-331919) |
|
fco (3.14416) |
|
pgl (1.54028) |
|
cbr (1.40773) |
|
ece (0.687916) |
|
ebs (0.591506) |
|
fbs (0.526039) |
|
fhi (0.508733) |
|
cbe (0.478469) |
|
hyp (0.42851) |
|
sug (0.381874) |
|
spc (0.340097) |
|
ecc (0.23007) |
|
fcc (0.197785) |
|
cli (0.152812) |
|
pty (0.142714) |
|
nca (0.136874) |
|
kid (0.129735) |
|
ret (0.128733) |
|
fco (3.14416) |
|
pgl (1.54028) |
|
cbr (1.40773) |
|
ece (0.687916) |
|
ebs (0.591506) |
|
fbs (0.526039) |
|
fhi (0.508733) |
|
cbe (0.478469) |
|
hyp (0.42851) |
|
sug (0.381874) |
|
spc (0.340097) |
|
ecc (0.23007) |
|
fcc (0.197785) |
|
cli (0.152812) |
|
pty (0.142714) |
|
nca (0.136874) |
|
kid (0.129735) |
|
ret (0.128733) |
