Non-Coding RNA Search

Ss1.1-rspc031_g12.5

Sequence:


               
               TTCACATAAGAGATTGTCGCTGTTTGCCATACGTTGAAAATGACCTTTATGTTTCTCTTG
ACTTTCGGTTATAGTAAGAAAAGTGGTTGATAATTATAGATGTCTAGGTACTTCAAGGGC
ACTTCAACTGAGAGTTTTGTCTTGGATATTCTTGAAAGTTTATATTTTTATAATTTTTTT
TTTTTTTTTTTTTTACATCAGAGGTTTCTTTGCAGTGGCTTAATGTTTGAAATTATTTTG
TGGCTTTTTTTTTTTTTGTAAATATTGAAATGTAGCAATAATGTCTTTTGAATATTCCCA
AGCCCATGAGTCCTTGAAAATATTTTTTATATATACAATAACTTTATGTGTAAATATGTA
AGCGGTGCCAGTTTAAAGAATGTTGATGTTCCATGTGTTTTTTTTCCCCTGATATATTGT
CCAGTTGTTGACAGTTCTGAAGAATTCTAATAAAAGTGTAAATATATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCACATAAGAGATTGTCGCTGTTTGCCATACGTTGAAAATGACCTTTATGTTTCTCTTG
ACTTTCGGTTATAGTAAGAAAAGTGGTTGATAATTATAGATGTCTAGGTACTTCAAGGGC
ACTTCAACTGAGAGTTTTGTCTTGGATATTCTTGAAAGTTTATATTTTTATAATTTTTTT
TTTTTTTTTTTTTTACATCAGAGGTTTCTTTGCAGTGGCTTAATGTTTGAAATTATTTTG
TGGCTTTTTTTTTTTTTGTAAATATTGAAATGTAGCAATAATGTCTTTTGAATATTCCCA
AGCCCATGAGTCCTTGAAAATATTTTTTATATATACAATAACTTTATGTGTAAATATGTA
AGCGGTGCCAGTTTAAAGAATGTTGATGTTCCATGTGTTTTTTTTCCCCTGATATATTGT
CCAGTTGTTGACAGTTCTGAAGAATTCTAATAAAAGTGTAAATATATA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               7-466, gnl|bosTau2|chr6 (36549651-36549203)
               

               
               7-466, gnl|Hg17|chr4 (55447366-55447803)
               

               
               7-466, gnl|Mm7|chr5 (75074525-75074966)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-466, gnl|bosTau2|chr6 (36549651-36549203)
               

               
               7-466, gnl|Hg17|chr4 (55447366-55447803)
               

               
               7-466, gnl|Mm7|chr5 (75074525-75074966)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               fbs (0.350693)
               

               
               eye (0.170503)
               

               
               thg (0.126791)
               

               
               ese (0.126502)
               

               
               spc (0.113366)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.350693)
               

               
               eye (0.170503)
               

               
               thg (0.126791)
               

               
               ese (0.126502)
               

               
               spc (0.113366)

	7-466, gnl\|bosTau2\|chr6 (36549651-36549203)
	7-466, gnl\|Hg17\|chr4 (55447366-55447803)
	7-466, gnl\|Mm7\|chr5 (75074525-75074966)

	fbs (0.350693)
	eye (0.170503)
	thg (0.126791)
	ese (0.126502)
	spc (0.113366)