Non-Coding RNA Search

Ss1.1-rspc031_o7.5

Sequence:


               
               AACGAGTTAAGATGTAAAGCACAGTTAAGTAGTTAAGAAAATGACTACCAGTAAACATGC
TTTTCCTTGGCTAAAGCAGAGTAGGCTCTGATTCATAGCTTAAGAACCGTTTTTCACCGT
TTTTGAGGAATCTTAAGCAGTGGGGAAATACTGGTCCCAGTGATCAATAGAACCAAATAT
GTTGCTCTTTTTTTCAATTGCAGTTGATTCATTCCCTGAAATGAATATTTTGAAGCAGAA
GGAAATAAATATTGCAGCTTATCAGTGATGTTGTAAAAATAAATGTCTGAACATATGAAT
TTAATATTGATTTCAACATTTAACTGAGATAAGCTCAAAGGTGTTTTTAAATACAAATTA
AGATGTATGTGCTGACATTGCTGAAGTAATGGTTTTTGTTTCTAACACAATGCAGGCATG
GATTCCGTGAAGGAACAACACCTAAACCCAAGAGGGCAGCTGTTGCGGCATCCAGTTCAT
CTTAAGGATTTCAGCAAAGTCACGCAATAAATGTTCTGGTTTTAAAAAATTAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACGAGTTAAGATGTAAAGCACAGTTAAGTAGTTAAGAAAATGACTACCAGTAAACATGC
TTTTCCTTGGCTAAAGCAGAGTAGGCTCTGATTCATAGCTTAAGAACCGTTTTTCACCGT
TTTTGAGGAATCTTAAGCAGTGGGGAAATACTGGTCCCAGTGATCAATAGAACCAAATAT
GTTGCTCTTTTTTTCAATTGCAGTTGATTCATTCCCTGAAATGAATATTTTGAAGCAGAA
GGAAATAAATATTGCAGCTTATCAGTGATGTTGTAAAAATAAATGTCTGAACATATGAAT
TTAATATTGATTTCAACATTTAACTGAGATAAGCTCAAAGGTGTTTTTAAATACAAATTA
AGATGTATGTGCTGACATTGCTGAAGTAATGGTTTTTGTTTCTAACACAATGCAGGCATG
GATTCCGTGAAGGAACAACACCTAAACCCAAGAGGGCAGCTGTTGCGGCATCCAGTTCAT
CTTAAGGATTTCAGCAAAGTCACGCAATAAATGTTCTGGTTTTAAAAAATTAAAAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               226-527, gnl|bosTau2|chr20 (19707856-19708164)
               

               
               226-527, gnl|Hg17|chr5 (40868620-40868318)
               

               
               226-527, gnl|Mm7|chr15 (4943264-4943552)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               226-527, gnl|bosTau2|chr20 (19707856-19708164)
               

               
               226-527, gnl|Hg17|chr5 (40868620-40868318)
               

               
               226-527, gnl|Mm7|chr15 (4943264-4943552)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               liv (0.146284)
               

               
               spc (0.113366)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)
               

               
               spc (0.113366)

	226-527, gnl\|bosTau2\|chr20 (19707856-19708164)
	226-527, gnl\|Hg17\|chr5 (40868620-40868318)
	226-527, gnl\|Mm7\|chr15 (4943264-4943552)