Non-Coding RNA Search

Ss1.1-rspc032_j7.5

Sequence:


               
               TTGCCAAAAACCCTGTAAAACCAGGCACTAACTCCCGCAACATACTGATCTCCACCCCAA
GTGCACTCATTCCACTTCCCACTGCTCCCCCAACTTTTGGTACATTGGCTCTGCTTCCAC
AGTTTGGACACAGGAAGGTCATGAAGGGGAACAAACATTGTCATGCTTCTAGAAGCAGTC
AGTACCAGGGGAAGGAGATGAGCAGGTAGGCCAGTGATCTCTCTTGCCATCCTCTGGCAG
CCCAGGTTAAGTGCCATGATGGCGGGAACTAAATGGATCTCATCAGGTGAGTAGTAGACC
CTCTGTAGTGGCAGGAAGAATACACTGAGCCCATTGTCATCATTATTGCTAGTTTTTGGA
TCACAACATATTGTGTCTTGTTTTCTACTTTCCTGATGTGGAGAGCGTCCTCTAACATTG
ACATTGAGTTTGTGTGTGCATTCAAGCTCATGCATGTGCTTTATTCTAGCACAAAAATCT
GATTTCCTTTTAACCTGTGACTGAGGAAATAGATTACGCTAGTTTGTTGTCACCCTATAA
GGTATTTGCACTTCCTAAAACACATAATGCTTTGAACTCAGTTTTACACTCATAAATGTG
GGCAAAATACAAGATCCATATCCAATGCAGCTGTGAGACCAATACTGAACTGAAATGAAA
CATTTCATCAAAAATAGCTGATTCTTTTGTTTGTTTAGGGCAGATGTCAGCAGACTTTTT
CTATAAAAGGCTAAGTAGAAAATCCTCATCCCAGCCATGTGGTATCTGTTAAAATGTCTC
AGGTCTGCTATTAAATGAAGGCAGTCTGGACTTGTGAACAAATGGACGTGCTATATTCCA
ATAAAACTACCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGCCAAAAACCCTGTAAAACCAGGCACTAACTCCCGCAACATACTGATCTCCACCCCAA
GTGCACTCATTCCACTTCCCACTGCTCCCCCAACTTTTGGTACATTGGCTCTGCTTCCAC
AGTTTGGACACAGGAAGGTCATGAAGGGGAACAAACATTGTCATGCTTCTAGAAGCAGTC
AGTACCAGGGGAAGGAGATGAGCAGGTAGGCCAGTGATCTCTCTTGCCATCCTCTGGCAG
CCCAGGTTAAGTGCCATGATGGCGGGAACTAAATGGATCTCATCAGGTGAGTAGTAGACC
CTCTGTAGTGGCAGGAAGAATACACTGAGCCCATTGTCATCATTATTGCTAGTTTTTGGA
TCACAACATATTGTGTCTTGTTTTCTACTTTCCTGATGTGGAGAGCGTCCTCTAACATTG
ACATTGAGTTTGTGTGTGCATTCAAGCTCATGCATGTGCTTTATTCTAGCACAAAAATCT
GATTTCCTTTTAACCTGTGACTGAGGAAATAGATTACGCTAGTTTGTTGTCACCCTATAA
GGTATTTGCACTTCCTAAAACACATAATGCTTTGAACTCAGTTTTACACTCATAAATGTG
GGCAAAATACAAGATCCATATCCAATGCAGCTGTGAGACCAATACTGAACTGAAATGAAA
CATTTCATCAAAAATAGCTGATTCTTTTGTTTGTTTAGGGCAGATGTCAGCAGACTTTTT
CTATAAAAGGCTAAGTAGAAAATCCTCATCCCAGCCATGTGGTATCTGTTAAAATGTCTC
AGGTCTGCTATTAAATGAAGGCAGTCTGGACTTGTGAACAAATGGACGTGCTATATTCCA
ATAAAACTACCA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               1-851, gnl|bosTau2|chr5 (57876796-57875953)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-851, gnl|bosTau2|chr5 (57876796-57875953)

Expressed library(ies): 5 entry(ies)

More info

Expressed library(ies): 5 entry(ies)

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               bla (0.248694)
               

               
               cki (0.165235)
               

               
               ova (0.129132)
               

               
               ebs (0.118301)
               

               
               spc (0.113366)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bla (0.248694)
               

               
               cki (0.165235)
               

               
               ova (0.129132)
               

               
               ebs (0.118301)
               

               
               spc (0.113366)

	bla (0.248694)
	cki (0.165235)
	ova (0.129132)
	ebs (0.118301)
	spc (0.113366)