Ss1.1-rspc033_h19.5
|
TAAAAATTTTCTTGAGCATTGGTGATGAGAGTCTTCAAGAAGCAGATATCAACGTGCAGT
CAGCTTCTGACTATGGCGATGAGAAGATGGAAGAACACACTGAAATTTTTCAAAACGGCT
TCAATCCTGAAGAGGTTAACTGTGAGGACTGTGCTCAAGAGTTAAATGAGAAGCCGCAGG
GCACAGCGGAGGCGAGCACTTCGTGCCCTGTTACACTCAAGAGAGCAGCGCTGTTAAATG
CAATTCTTCACTCGGCGTATAGTGAGACGTTTCTTCTGCCGCATTTGAAAGACATCCCAG
CACAGCATATCACTTTATTTCTCCAGTATTTGTATTTCCTTTATCTGAAGTGTAGTGAAA
ATGCTACTATGACTCTTCCTGGAATAAATCCTCCAACCCTGAACCAGATTATGGATTGGA
TATGTCTACTTCTAGATGCTAATTTTACTGTTGTGGTAATGATACCAGAAGCAAAAAGGC
TACTGTTAAGTCTTTACAAGTTTGTGAAATCTCAGATAAGCATTTGTTCTGAGCTCAACA
AGATTGAAGTAAGTTTTCGTGAGCTACAGAAATTAAATCAAGAAAAGACTAATAGAGGAT
TATATTCCATTGAAGTGCTGGAACTCTTCTGATACTGCCAGTTCTCCTTCATAGACATTT
TATGAAGCTCTTTTATGTGACTTCTTCCTACTCATCCAGGCAAGAGATGTGTTTTGTTTG
TGACTGTCTCTCAGTGACAAGAGAAATATATCACCAGGCACCTAGACCATCACTCTTTGC
TGGTCTTAGATTGGACTGCAGGTTTCACATGAACCTATTCTAATTAATGGACATTGGTGG
AGAGGGGTTCTGAAACTTTTTTAAAATATGTAACTGAGCTGCTTTTAAGTAAACTTATTT
GTGTATTGATAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TAAAAATTTTCTTGAGCATTGGTGATGAGAGTCTTCAAGAAGCAGATATCAACGTGCAGT
CAGCTTCTGACTATGGCGATGAGAAGATGGAAGAACACACTGAAATTTTTCAAAACGGCT
TCAATCCTGAAGAGGTTAACTGTGAGGACTGTGCTCAAGAGTTAAATGAGAAGCCGCAGG
GCACAGCGGAGGCGAGCACTTCGTGCCCTGTTACACTCAAGAGAGCAGCGCTGTTAAATG
CAATTCTTCACTCGGCGTATAGTGAGACGTTTCTTCTGCCGCATTTGAAAGACATCCCAG
CACAGCATATCACTTTATTTCTCCAGTATTTGTATTTCCTTTATCTGAAGTGTAGTGAAA
ATGCTACTATGACTCTTCCTGGAATAAATCCTCCAACCCTGAACCAGATTATGGATTGGA
TATGTCTACTTCTAGATGCTAATTTTACTGTTGTGGTAATGATACCAGAAGCAAAAAGGC
TACTGTTAAGTCTTTACAAGTTTGTGAAATCTCAGATAAGCATTTGTTCTGAGCTCAACA
AGATTGAAGTAAGTTTTCGTGAGCTACAGAAATTAAATCAAGAAAAGACTAATAGAGGAT
TATATTCCATTGAAGTGCTGGAACTCTTCTGATACTGCCAGTTCTCCTTCATAGACATTT
TATGAAGCTCTTTTATGTGACTTCTTCCTACTCATCCAGGCAAGAGATGTGTTTTGTTTG
TGACTGTCTCTCAGTGACAAGAGAAATATATCACCAGGCACCTAGACCATCACTCTTTGC
TGGTCTTAGATTGGACTGCAGGTTTCACATGAACCTATTCTAATTAATGGACATTGGTGG
AGAGGGGTTCTGAAACTTTTTTAAAATATGTAACTGAGCTGCTTTTAAGTAAACTTATTT
GTGTATTGATAA
|
|
15-235, gnl|bosTau2|chr19 (43737817-43738049) |
|
15-235, gnl|canFam2|chr9 (15954342-15954113) |
|
15-235, gnl|dasNov1|scaffold_13173 (40598-40384) |
|
15-235, gnl|Hg17|chr17 (63164698-63164933) |
|
15-235, gnl|hg17|chrX (148954700-148954930) |
|
15-235, gnl|mm7|chr11 (107282502-107282252) |
|
15-235, gnl|Mm7|chr11 (107282504-107282251) |
|
15-235, gnl|monDom2|scaffold_18 (17580998-17580774) |
|
15-235, gnl|oryCun1|scaffold_205751 (157614-157844) |
|
15-235, gnl|panTro1|chrX (154176292-154176522) |
|
15-235, gnl|rheMac2|chrX (148223615-148223845) |
| |
|
514-912, gnl|bosTau2|chr19 (43741289-43741684) |
|
514-912, gnl|Hg17|chr17 (63170319-63170714) |
|
514-912, gnl|Mm7|chr11 (107276684-107276216) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
15-235, gnl|bosTau2|chr19 (43737817-43738049) |
|
15-235, gnl|canFam2|chr9 (15954342-15954113) |
|
15-235, gnl|dasNov1|scaffold_13173 (40598-40384) |
|
15-235, gnl|Hg17|chr17 (63164698-63164933) |
|
15-235, gnl|hg17|chrX (148954700-148954930) |
|
15-235, gnl|mm7|chr11 (107282502-107282252) |
|
15-235, gnl|Mm7|chr11 (107282504-107282251) |
|
15-235, gnl|monDom2|scaffold_18 (17580998-17580774) |
|
15-235, gnl|oryCun1|scaffold_205751 (157614-157844) |
|
15-235, gnl|panTro1|chrX (154176292-154176522) |
|
15-235, gnl|rheMac2|chrX (148223615-148223845) |
| |
|
514-912, gnl|bosTau2|chr19 (43741289-43741684) |
|
514-912, gnl|Hg17|chr17 (63170319-63170714) |
|
514-912, gnl|Mm7|chr11 (107276684-107276216) |
|
isp (0.300752) |
|
tra (0.246184) |
|
spc (0.226732) |
|
hea (0.204499) |
|
fcc (0.197785) |
|
mgm (0.180343) |
|
gul (0.177588) |
|
rec (0.17307) |
|
duo (0.172801) |
|
fco (0.157208) |
|
lyg (0.133103) |
|
kid (0.129735) |
|
ret (0.128733) |
|
bla (0.124347) |
|
isp (0.300752) |
|
tra (0.246184) |
|
spc (0.226732) |
|
hea (0.204499) |
|
fcc (0.197785) |
|
mgm (0.180343) |
|
gul (0.177588) |
|
rec (0.17307) |
|
duo (0.172801) |
|
fco (0.157208) |
|
lyg (0.133103) |
|
kid (0.129735) |
|
ret (0.128733) |
|
bla (0.124347) |
