Non-Coding RNA Search

Ss1.1-rspc035_p18.5

Sequence:


               
               GTAATAAAGGCTTCAGAAATGTTTTCTTATATATGTTCATGACTGGTAATTTTGTTTGAG
AAATTTTGGGGGATATTGTGTTTTGTTTTTTTAATTTGGGCAGTTGAACAGAACTCAGTA
GCTTCATTCACCACCTGATTTTTAATGTTTTAATTGAAAAATCAACCTGAGTCATTTTTT
GCATTTCAACACTGTTGACTTTTTGATGCATACCTGAACTAGATGTTAAGAATTGACTTC
TGTCTCCCCTTTCAAAGAATACATTTATTCCGAAAGACTTAAAAGTAAATGCCTTTGGTA
ACTTACTGTGACTTCTTTTTAGAGCCAATACGATATAGCAGGTATCTAATTTTTTATTTT
GATCTTCACCTCTTTGAAAAAAAATAGGAATTATAGAGATTGCCTTTTGAATAGCTATGT
ACTTGCTGAATTTCCTAGTTTGTATCAACTTTGATTTTTGTCTCTAAGAGCTAATATATT
TTATAACTTCTAAAAGAGGTACATTATAACCTTTACTAAATCTAGCTTTTGGATAAAAGC
TATTTGGTTGATAGTTTTTTTAGTGTTCCTAAGCCATTAATTCTGGACTCATCATATTCT
GTTAAATCTCCTAGAGCAAGCATCAGCAGAGTATGGCCTACCAACCAAAATCAGCCTGCT
GCCTGTTTTTGTATGGCTGGTTGAGATGAGAATGGATTTTACAATTTTTAAAGTGGTTGG
TGGAAAACAAAAGAATAGTATTTTCTGACATGTGAAAATTACTTAATGTCCATAAATAAA
GTTTTTTGGAATGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTAATAAAGGCTTCAGAAATGTTTTCTTATATATGTTCATGACTGGTAATTTTGTTTGAG
AAATTTTGGGGGATATTGTGTTTTGTTTTTTTAATTTGGGCAGTTGAACAGAACTCAGTA
GCTTCATTCACCACCTGATTTTTAATGTTTTAATTGAAAAATCAACCTGAGTCATTTTTT
GCATTTCAACACTGTTGACTTTTTGATGCATACCTGAACTAGATGTTAAGAATTGACTTC
TGTCTCCCCTTTCAAAGAATACATTTATTCCGAAAGACTTAAAAGTAAATGCCTTTGGTA
ACTTACTGTGACTTCTTTTTAGAGCCAATACGATATAGCAGGTATCTAATTTTTTATTTT
GATCTTCACCTCTTTGAAAAAAAATAGGAATTATAGAGATTGCCTTTTGAATAGCTATGT
ACTTGCTGAATTTCCTAGTTTGTATCAACTTTGATTTTTGTCTCTAAGAGCTAATATATT
TTATAACTTCTAAAAGAGGTACATTATAACCTTTACTAAATCTAGCTTTTGGATAAAAGC
TATTTGGTTGATAGTTTTTTTAGTGTTCCTAAGCCATTAATTCTGGACTCATCATATTCT
GTTAAATCTCCTAGAGCAAGCATCAGCAGAGTATGGCCTACCAACCAAAATCAGCCTGCT
GCCTGTTTTTGTATGGCTGGTTGAGATGAGAATGGATTTTACAATTTTTAAAGTGGTTGG
TGGAAAACAAAAGAATAGTATTTTCTGACATGTGAAAATTACTTAATGTCCATAAATAAA
GTTTTTTGGAATGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               3-761, gnl|bosTau2|chr27 (12701465-12702193)
               

               
               3-761, gnl|Hg17|chr8 (17131137-17129979)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-761, gnl|bosTau2|chr27 (12701465-12702193)
               

               
               3-761, gnl|Hg17|chr8 (17131137-17129979)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               spc (0.226732)
               

               
               fat (0.147427)
               

               
               tra (0.123092)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spc (0.226732)
               

               
               fat (0.147427)
               

               
               tra (0.123092)

	3-761, gnl\|bosTau2\|chr27 (12701465-12702193)
	3-761, gnl\|Hg17\|chr8 (17131137-17129979)