Non-Coding RNA Search

Ss1.1-rspl02_g1.5

Sequence:


               
               CTCTACGGTTTTAGATAATACAGAAATGTTGAAGAGCAGACATGGGCCAGCACTTCCGTC
TGGCATTGCAGTCTGTACAGGGTGTGTCAGTGCTGTCCTAAGAGTGTTCTCTTAAGTAGC
ATTAGCTGATCTAATCTCAACAGTTCATTCGCAAGTATTCGTTTTGTATTAATTATCCAG
CCATTGTAGTTTCGGTTTGGTTAAGAGGTACTGTTTAAGTTGCGGCGGCATTTAACTGAA
TGATGGATGAAAGGCCTGATGCGTATTGGGGACTCTCTTACCATGTTTCTCTTAGATAAT
ATGTATTATAAAAACATTTTTAAGGCCTTGGTAGCAATCATGAAGTAAGAAGAATTCAAT
GTGTGTCAGTTACACCAACCTGTGGATGGTATTCAAATGTGATTTTCTGTTAGCTTTTCT
GTATGTATTGATGACTGGTTTGTTTTAGGCATTTAAGGCTAATAAACCGTTCGCATACTG
GCAGTCGCTTTGTTAGTAATAGAGTGTTAGTGGTGGCCACTTGATGGACATTTATTACCT
GCCTGTTTTCTTTTGTTTCCCCCTCTGGATACATAATAGACGTGCGTTATCTTTTTTTCG
GTGAACTTGTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCTACGGTTTTAGATAATACAGAAATGTTGAAGAGCAGACATGGGCCAGCACTTCCGTC
TGGCATTGCAGTCTGTACAGGGTGTGTCAGTGCTGTCCTAAGAGTGTTCTCTTAAGTAGC
ATTAGCTGATCTAATCTCAACAGTTCATTCGCAAGTATTCGTTTTGTATTAATTATCCAG
CCATTGTAGTTTCGGTTTGGTTAAGAGGTACTGTTTAAGTTGCGGCGGCATTTAACTGAA
TGATGGATGAAAGGCCTGATGCGTATTGGGGACTCTCTTACCATGTTTCTCTTAGATAAT
ATGTATTATAAAAACATTTTTAAGGCCTTGGTAGCAATCATGAAGTAAGAAGAATTCAAT
GTGTGTCAGTTACACCAACCTGTGGATGGTATTCAAATGTGATTTTCTGTTAGCTTTTCT
GTATGTATTGATGACTGGTTTGTTTTAGGCATTTAAGGCTAATAAACCGTTCGCATACTG
GCAGTCGCTTTGTTAGTAATAGAGTGTTAGTGGTGGCCACTTGATGGACATTTATTACCT
GCCTGTTTTCTTTTGTTTCCCCCTCTGGATACATAATAGACGTGCGTTATCTTTTTTTCG
GTGAACTTGTCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               113-610, gnl|bosTau2|chr5 (5290710-5290224)
               

               
               113-610, gnl|Hg17|chr12 (78484863-78484353)
               

               
               113-610, gnl|Mm7|chr10 (107880182-107880886)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               113-610, gnl|bosTau2|chr5 (5290710-5290224)
               

               
               113-610, gnl|Hg17|chr12 (78484863-78484353)
               

               
               113-610, gnl|Mm7|chr10 (107880182-107880886)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               liv (0.146284)
               

               
               spl (0.143184)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)
               

               
               spl (0.143184)

	113-610, gnl\|bosTau2\|chr5 (5290710-5290224)
	113-610, gnl\|Hg17\|chr12 (78484863-78484353)
	113-610, gnl\|Mm7\|chr10 (107880182-107880886)