Ss1.1-rspl02_j18.5
|
GTTTTTCTGAGACCAGCTTCCTCTCCAGAAATGATCATTCCTTCCTCAAGATCAGTTATC
TCACCTTCCTCCCTTCTGATGATGATTTTTATGACTGCAAAGTGGAGCACTGGGGCCTGG
ATAAGCCACTTCTGAAACACTGGGAACCTGAGATTCCAGCCCCCATGTCAGAGCTGACAG
AGACGGTGGTCTGCGCCCTGGGGTTGATCGTGGGCCTTGTGGGCATCGTGGTGGGTACTG
TCCTCCTTATTCGAGGCCTGCGCTCAGGTGGTCTCTCTAGACACCAAGGGTCCTTGTGAG
TCACACTCCAGAAGAGAAGGTGCACTGCCCGCCTACAAGAGCTGAAGAGTGGATGTGCTC
AACGACCTAGAACTATTTTCTGGCCAAATTCGTCATATACCTTCTCTCTTCCTACATTCT
TCTTCTCACCTCTTCTCTGGAACTTAAGGTGCTGTGTCATCTCAGAATTCATATGCCCTT
GGAATCCTCTTCCTGACCTTCTAGGTCTTTTACTTTTCTCAGTTGTTACCTGTTATGGGA
TCTCTGAGATATCCCACTCGGCTACCTGATCCCTCAGTGACCCTAAACTAATATGTACAT
GGAAACAGTAAATCGCTTTATGAGGTTTTTGTACTGAATTTTTTCCTGTCTTTCATCTCA
AGGCTGACTAGGACCATGACCTCTTGCGCTTCAGGCCCATTTAATCTCATTTCCCAGGTT
ATGCTTCATTCCCAGTAACACAGGAGAAGCATGTATATACTGACAATAAATATTTTGCTG
TCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GTTTTTCTGAGACCAGCTTCCTCTCCAGAAATGATCATTCCTTCCTCAAGATCAGTTATC
TCACCTTCCTCCCTTCTGATGATGATTTTTATGACTGCAAAGTGGAGCACTGGGGCCTGG
ATAAGCCACTTCTGAAACACTGGGAACCTGAGATTCCAGCCCCCATGTCAGAGCTGACAG
AGACGGTGGTCTGCGCCCTGGGGTTGATCGTGGGCCTTGTGGGCATCGTGGTGGGTACTG
TCCTCCTTATTCGAGGCCTGCGCTCAGGTGGTCTCTCTAGACACCAAGGGTCCTTGTGAG
TCACACTCCAGAAGAGAAGGTGCACTGCCCGCCTACAAGAGCTGAAGAGTGGATGTGCTC
AACGACCTAGAACTATTTTCTGGCCAAATTCGTCATATACCTTCTCTCTTCCTACATTCT
TCTTCTCACCTCTTCTCTGGAACTTAAGGTGCTGTGTCATCTCAGAATTCATATGCCCTT
GGAATCCTCTTCCTGACCTTCTAGGTCTTTTACTTTTCTCAGTTGTTACCTGTTATGGGA
TCTCTGAGATATCCCACTCGGCTACCTGATCCCTCAGTGACCCTAAACTAATATGTACAT
GGAAACAGTAAATCGCTTTATGAGGTTTTTGTACTGAATTTTTTCCTGTCTTTCATCTCA
AGGCTGACTAGGACCATGACCTCTTGCGCTTCAGGCCCATTTAATCTCATTTCCCAGGTT
ATGCTTCATTCCCAGTAACACAGGAGAAGCATGTATATACTGACAATAAATATTTTGCTG
TCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
|
|
1-144, gnl|bosTau2|chr23 (21205107-21204964) |
|
1-144, gnl|canFam2|chr12 (5229171-5229491) |
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1-144, gnl|danRer3|chr8 (33023544-33023227) |
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1-144, gnl|dasNov1|scaffold_9793 (33694-34012) |
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1-144, gnl|echTel1|scaffold_284098 (40271-39967) |
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1-144, gnl|hg17|chr6 (32717706-32718026) |
|
1-144, gnl|Hg17|chr6 (32717865-32718008) |
|
1-144, gnl|loxAfr1|scaffold_49177 (20350-20656) |
|
1-144, gnl|mm7|chr17 (32361847-32361529) |
|
1-144, gnl|Mm7|chr17 (32361688-32361545) |
|
1-144, gnl|monDom2|scaffold_42 (16389393-16389096) |
|
1-144, gnl|oryCun1|scaffold_178605 (11945-12265) |
|
1-144, gnl|panTro1|chr5 (33169459-33169779) |
|
1-144, gnl|rheMac2|chr4 (32378030-32378350) |
|
1-144, gnl|rn3|chr20 (4701676-4701994) |
|
1-144, gnl|xenTro1|scaffold_1109 (301330-301076) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-144, gnl|bosTau2|chr23 (21205107-21204964) |
|
1-144, gnl|canFam2|chr12 (5229171-5229491) |
|
1-144, gnl|danRer3|chr8 (33023544-33023227) |
|
1-144, gnl|dasNov1|scaffold_9793 (33694-34012) |
|
1-144, gnl|echTel1|scaffold_284098 (40271-39967) |
|
1-144, gnl|hg17|chr6 (32717706-32718026) |
|
1-144, gnl|Hg17|chr6 (32717865-32718008) |
|
1-144, gnl|loxAfr1|scaffold_49177 (20350-20656) |
|
1-144, gnl|mm7|chr17 (32361847-32361529) |
|
1-144, gnl|Mm7|chr17 (32361688-32361545) |
|
1-144, gnl|monDom2|scaffold_42 (16389393-16389096) |
|
1-144, gnl|oryCun1|scaffold_178605 (11945-12265) |
|
1-144, gnl|panTro1|chr5 (33169459-33169779) |
|
1-144, gnl|rheMac2|chr4 (32378030-32378350) |
|
1-144, gnl|rn3|chr20 (4701676-4701994) |
|
1-144, gnl|xenTro1|scaffold_1109 (301330-301076) |
|
lnt (0.853849) |
|
col (0.780031) |
|
hea (0.408998) |
|
lin (0.291206) |
|
thg (0.253582) |
|
med (0.232504) |
|
jca (0.22792) |
|
sto (0.179824) |
|
ill (0.175593) |
|
sin (0.174948) |
|
spl (0.143184) |
|
hlv (0.139256) |
|
ova (0.129132) |
|
lnt (0.853849) |
|
col (0.780031) |
|
hea (0.408998) |
|
lin (0.291206) |
|
thg (0.253582) |
|
med (0.232504) |
|
jca (0.22792) |
|
sto (0.179824) |
|
ill (0.175593) |
|
sin (0.174948) |
|
spl (0.143184) |
|
hlv (0.139256) |
|
ova (0.129132) |
