Non-Coding RNA Search

Ss1.1-rspl02_j4.5

Sequence:


               
               CCACATTCCGACTGCTCTTTTAAAAATGCTGTGATATATTTGAATGGAATCAGTTTACTT
CAGGTTCTTACCACATAATTTTAATTTCTGGTCACTGAGTGCTGTTTTAGGGTAGGAAGG
GTATTTAGGAACTGTGTTGTAATTATAATTGTAAATGTGTGTTCTAAAATCTGGAAATTT
GCTAGCCATGCTTGGCTTTTATAGATGTATTGCTGATGTGCTGTGCCTGTGCATGTTTCA
AATTCAGACTTCAACTCTCTTGTGCTCTGGATTTCACAAATCTCATATGTAAAATCCCTT
TTTTTTTTTTCCAGGAGGCAGTTTGTTCTTTGGTGTTAGATCTGGTAGACTTCATATTCA
CTAATCTTTGGTGTAACTTTGGGAAGTGCTGGAAGGATTTATGTTTTTCTCTGTTGAAAC
TAAGAATGGTTTACCTGGAAGCAGCCTCAGATTTGTCTAACCATTGATTCTTTCTTTTGG
GAATGTTTTATCTTTCATTATTACTTGAAGCAGATATCTCTACTTGAGGATGATTCTTGT
TTCTACATAATCAAGTATTTGTGCAATGAATAGAATTCGAATTTCTTTATTTATGATCAC
TTAACTATGTGTAGATATCTACGTGATGCTCCCCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCACATTCCGACTGCTCTTTTAAAAATGCTGTGATATATTTGAATGGAATCAGTTTACTT
CAGGTTCTTACCACATAATTTTAATTTCTGGTCACTGAGTGCTGTTTTAGGGTAGGAAGG
GTATTTAGGAACTGTGTTGTAATTATAATTGTAAATGTGTGTTCTAAAATCTGGAAATTT
GCTAGCCATGCTTGGCTTTTATAGATGTATTGCTGATGTGCTGTGCCTGTGCATGTTTCA
AATTCAGACTTCAACTCTCTTGTGCTCTGGATTTCACAAATCTCATATGTAAAATCCCTT
TTTTTTTTTTCCAGGAGGCAGTTTGTTCTTTGGTGTTAGATCTGGTAGACTTCATATTCA
CTAATCTTTGGTGTAACTTTGGGAAGTGCTGGAAGGATTTATGTTTTTCTCTGTTGAAAC
TAAGAATGGTTTACCTGGAAGCAGCCTCAGATTTGTCTAACCATTGATTCTTTCTTTTGG
GAATGTTTTATCTTTCATTATTACTTGAAGCAGATATCTCTACTTGAGGATGATTCTTGT
TTCTACATAATCAAGTATTTGTGCAATGAATAGAATTCGAATTTCTTTATTTATGATCAC
TTAACTATGTGTAGATATCTACGTGATGCTCCCCAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-636, gnl|bosTau2|chr10 (56384190-56384806)
               

               
               1-636, gnl|Hg17|chr14 (74336192-74336808)
               

               
               1-636, gnl|Mm7|chr12 (83030766-83031522)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-636, gnl|bosTau2|chr10 (56384190-56384806)
               

               
               1-636, gnl|Hg17|chr14 (74336192-74336808)
               

               
               1-636, gnl|Mm7|chr12 (83030766-83031522)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ski (0.146735)
               

               
               spl (0.143184)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ski (0.146735)
               

               
               spl (0.143184)

	1-636, gnl\|bosTau2\|chr10 (56384190-56384806)
	1-636, gnl\|Hg17\|chr14 (74336192-74336808)
	1-636, gnl\|Mm7\|chr12 (83030766-83031522)