Non-Coding RNA Search

Ss1.1-rspl03_e14.5

Sequence:


               
               GAGGGTCAGACAGGCTGTTATCATTTGGAAGCTTTTGCAGTTATTTTTTTCTTCTATTTT
ATTCTTCAAGTAAAAGCAATACCACAAAATAGAAAGTGAAAGTTTTAATTAAACAAAAAG
GAAGAACTCTAATGTTAAAACCAGTTTTTTACTGTATATGCTGGGCCAAATAGTGACAAA
CATTTTTTTCTGACAACTAAAGATAAGTGTTTTGAAAGTGCATTTTAATCTGAATAGGTT
TTTTTTCCCCCCCCATACTTACAAACTAGAATGTGTAATTTTAAAATTCCCATGACTTAA
AAGAGCACAGTTGGTATTCCAAAGGTATCGATGCTTGAAAGCTACAGTTAATTCTAAATG
CACTAAAGTTTTTGAAACAAATCTACCTTAGAACCTTTTTTAGTGTTGTATTTTTAAAAA
TATTTTATTTAAATTTTCTGAGTTAAATTCTGTATTGGAAAGATGTTAGTATCTTCCATT
ACGTATTGACTATGTTCCTCCCATTTTCAATCAAATATTTTATATAAATGAGTTGAGAAA
AGTTTAACATGCACTATTTATAATACTTTGCTGTTAACAGGCAATGTTCTGAAACTAAAT
TTATTTTTGTTCAGTGAACATAAGTTTAGATTTTTAAAGTTGGTAGATAATTTATCTCCA
CTAATATTTTTTTAAGAAACTGTGAAGAGATTAACAGGGAATAATTTTATTTCAGATTTA
CTAATAGAGTATGTACCTACAACTTCTTGAAATTCGAGTAAAGGCTAGACTTTTACTTTG
AAGAAGTATCACTGGATATTTTCCAGTGCTATTTCATTTTAAAAAATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGGGTCAGACAGGCTGTTATCATTTGGAAGCTTTTGCAGTTATTTTTTTCTTCTATTTT
ATTCTTCAAGTAAAAGCAATACCACAAAATAGAAAGTGAAAGTTTTAATTAAACAAAAAG
GAAGAACTCTAATGTTAAAACCAGTTTTTTACTGTATATGCTGGGCCAAATAGTGACAAA
CATTTTTTTCTGACAACTAAAGATAAGTGTTTTGAAAGTGCATTTTAATCTGAATAGGTT
TTTTTTCCCCCCCCATACTTACAAACTAGAATGTGTAATTTTAAAATTCCCATGACTTAA
AAGAGCACAGTTGGTATTCCAAAGGTATCGATGCTTGAAAGCTACAGTTAATTCTAAATG
CACTAAAGTTTTTGAAACAAATCTACCTTAGAACCTTTTTTAGTGTTGTATTTTTAAAAA
TATTTTATTTAAATTTTCTGAGTTAAATTCTGTATTGGAAAGATGTTAGTATCTTCCATT
ACGTATTGACTATGTTCCTCCCATTTTCAATCAAATATTTTATATAAATGAGTTGAGAAA
AGTTTAACATGCACTATTTATAATACTTTGCTGTTAACAGGCAATGTTCTGAAACTAAAT
TTATTTTTGTTCAGTGAACATAAGTTTAGATTTTTAAAGTTGGTAGATAATTTATCTCCA
CTAATATTTTTTTAAGAAACTGTGAAGAGATTAACAGGGAATAATTTTATTTCAGATTTA
CTAATAGAGTATGTACCTACAACTTCTTGAAATTCGAGTAAAGGCTAGACTTTTACTTTG
AAGAAGTATCACTGGATATTTTCCAGTGCTATTTCATTTTAAAAAATA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               10-825, gnl|bosTau2|chr26 (27983318-27984137)
               

               
               10-825, gnl|Hg17|chr10 (124741499-124740688)
               

               
               10-825, gnl|Mm7|chr7 (127745821-127744887)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-825, gnl|bosTau2|chr26 (27983318-27984137)
               

               
               10-825, gnl|Hg17|chr10 (124741499-124740688)
               

               
               10-825, gnl|Mm7|chr7 (127745821-127744887)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               liv (0.146284)
               

               
               spl (0.143184)
               

               
               ret (0.128733)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)
               

               
               spl (0.143184)
               

               
               ret (0.128733)

	10-825, gnl\|bosTau2\|chr26 (27983318-27984137)
	10-825, gnl\|Hg17\|chr10 (124741499-124740688)
	10-825, gnl\|Mm7\|chr7 (127745821-127744887)