Non-Coding RNA Search

Ss1.1-rspl04_g14.5

Sequence:


               
               GACACCAACCGAGTTTTTCTTCCACACGATGGCTGGCCGGGAAGGTCTGGTCGACACAGC
CGTGAAGACAGCTGAAACAGGATACATGCAGAGAAGGCTCGTAAAGTCCCTTGAAGATCT
TTGCTCCCAGTATGATTTGACAGTCCGAAGCTCCACAGGAGATATCATCCAGTTCATTTA
CGGGGGAGATGGCTTAGATCCTGCAGCCATGGAGGGAAAAGATGAACCCCTGGAGTTTAA
AAGGGTTCTGGACAACATCAAAGCAGTCTTCCCGTGCCAGAGCGAGCCTGCCCTCAGTAA
AAACGAGCTACTCCTGACCACGGAGTCCATCATGAAGAAGAACGAGTTTCTCTGCTGCCA
GGACAGCTTCCTGCAGGAAATAAAAAAATTCATTAAGGGGGTTTCTGAGAAGATCAAGAA
AACCAGGGATAAATATGGCATCAATGATAACGGCACGACAGAGCCCCGTGTACTGTACCA
GTTGGACCGGATCACCCCTACCCAAATAGAAAAGTTTCTAGAGACGTGTAGGGACAAGTA
CATGAGGGCACAGATGGAGCCGGGTTCTGCGGTGGGTGCACTTTGTGCCCAGAGCATTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACACCAACCGAGTTTTTCTTCCACACGATGGCTGGCCGGGAAGGTCTGGTCGACACAGC
CGTGAAGACAGCTGAAACAGGATACATGCAGAGAAGGCTCGTAAAGTCCCTTGAAGATCT
TTGCTCCCAGTATGATTTGACAGTCCGAAGCTCCACAGGAGATATCATCCAGTTCATTTA
CGGGGGAGATGGCTTAGATCCTGCAGCCATGGAGGGAAAAGATGAACCCCTGGAGTTTAA
AAGGGTTCTGGACAACATCAAAGCAGTCTTCCCGTGCCAGAGCGAGCCTGCCCTCAGTAA
AAACGAGCTACTCCTGACCACGGAGTCCATCATGAAGAAGAACGAGTTTCTCTGCTGCCA
GGACAGCTTCCTGCAGGAAATAAAAAAATTCATTAAGGGGGTTTCTGAGAAGATCAAGAA
AACCAGGGATAAATATGGCATCAATGATAACGGCACGACAGAGCCCCGTGTACTGTACCA
GTTGGACCGGATCACCCCTACCCAAATAGAAAAGTTTCTAGAGACGTGTAGGGACAAGTA
CATGAGGGCACAGATGGAGCCGGGTTCTGCGGTGGGTGCACTTTGTGCCCAGAGCATTGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               89-263, gnl|bosTau2|chr28 (26654841-26654667)
               

               
               89-263, gnl|Hg17|chr10 (79423134-79422960)
               

               
               89-263, gnl|Mm7|chr14 (22129728-22129554)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               89-263, gnl|bosTau2|chr28 (26654841-26654667)
               

               
               89-263, gnl|Hg17|chr10 (79423134-79422960)
               

               
               89-263, gnl|Mm7|chr14 (22129728-22129554)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               spl (0.143184)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)

	89-263, gnl\|bosTau2\|chr28 (26654841-26654667)
	89-263, gnl\|Hg17\|chr10 (79423134-79422960)
	89-263, gnl\|Mm7\|chr14 (22129728-22129554)