Non-Coding RNA Search

Ss1.1-rspl07_j21.5

Sequence:


               
               ACCATTTGGCCCCTTTCCCCTTCCCGGCCTCTCAGCTCATCCCGGACGCTGATTGGCCAG
GGTCGTGGGCCTTAGGCGCCTCCCTCGCCGTATTAATTCCGATCCTTGTCGAGATGTACA
AATTCAGTTCCACCTTTTCGGATCTCCTTTCTACTAACCGGTCCGAATCCCGCCTCTCGG
ACTCTCGGCTCCGGCCCCCGTCTCGCGGGGCCACGCGGGGGTCACGCGGGGTCACGTGCC
CGGCTCGCTCCAGGGTAGGTCAGACCGGACAGGGCACGTGAGGGCGGCGGCGGAAGCGGA
AATGTGGGGCGGGCCTCGTCGCCCAAGCTCCGGTGGGAATTGTAGTTCTGACGCGGTGTT
TCCTCCGCCTGCTGTTGCCCCAGAACGCAGGCCGCCGGAAGGGGACGCTGGTTCGCCGTG
TGCCGGCCGGAGTCGCGCTGTCTCCAACACCTGTGGAGAGTGCCTGAATCATGGTCATCC
GGGCTTTCTTAACGTTACGTTTGTTCTCTGCGTCCCGTCTCCGGTTTAGAACCTTGAGGT
GTAATGGTCACTGTTATAGTTGTCACCCTCCGGCCTCCTGGCATTTTTCGTGAGAAACAC
TTCGCAACCAATTCTATTCGTCCAAGCAGCTCAGTTTCGGTCTTTGCGCCTTTGTCAAGA
TCCTTCGTGATGTCCTTCCCGTCTGGCATCCTAGCCGCGTGTTGAAAGTCCTTCTCGTTC
TTAGAACTCGGTTCAGATGCTGCTGCTCCGTGGACTCCTGGATGCACTGCCTCCAGCTGG
GATCCTTCCTTCAAGTGCCCGCTGGGTGCTGTACCTGGCTTTAGCCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCATTTGGCCCCTTTCCCCTTCCCGGCCTCTCAGCTCATCCCGGACGCTGATTGGCCAG
GGTCGTGGGCCTTAGGCGCCTCCCTCGCCGTATTAATTCCGATCCTTGTCGAGATGTACA
AATTCAGTTCCACCTTTTCGGATCTCCTTTCTACTAACCGGTCCGAATCCCGCCTCTCGG
ACTCTCGGCTCCGGCCCCCGTCTCGCGGGGCCACGCGGGGGTCACGCGGGGTCACGTGCC
CGGCTCGCTCCAGGGTAGGTCAGACCGGACAGGGCACGTGAGGGCGGCGGCGGAAGCGGA
AATGTGGGGCGGGCCTCGTCGCCCAAGCTCCGGTGGGAATTGTAGTTCTGACGCGGTGTT
TCCTCCGCCTGCTGTTGCCCCAGAACGCAGGCCGCCGGAAGGGGACGCTGGTTCGCCGTG
TGCCGGCCGGAGTCGCGCTGTCTCCAACACCTGTGGAGAGTGCCTGAATCATGGTCATCC
GGGCTTTCTTAACGTTACGTTTGTTCTCTGCGTCCCGTCTCCGGTTTAGAACCTTGAGGT
GTAATGGTCACTGTTATAGTTGTCACCCTCCGGCCTCCTGGCATTTTTCGTGAGAAACAC
TTCGCAACCAATTCTATTCGTCCAAGCAGCTCAGTTTCGGTCTTTGCGCCTTTGTCAAGA
TCCTTCGTGATGTCCTTCCCGTCTGGCATCCTAGCCGCGTGTTGAAAGTCCTTCTCGTTC
TTAGAACTCGGTTCAGATGCTGCTGCTCCGTGGACTCCTGGATGCACTGCCTCCAGCTGG
GATCCTTCCTTCAAGTGCCCGCTGGGTGCTGTACCTGGCTTTAGCCTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-810, gnl|bosTau2|chr5 (59521840-59521009)
               

               
               1-810, gnl|Hg17|chr12 (8993588-8994422)
               

               
               1-810, gnl|Mm7|chr6 (122335017-122334217)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-810, gnl|bosTau2|chr5 (59521840-59521009)
               

               
               1-810, gnl|Hg17|chr12 (8993588-8994422)
               

               
               1-810, gnl|Mm7|chr6 (122335017-122334217)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               spl (0.143184)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)

	1-810, gnl\|bosTau2\|chr5 (59521840-59521009)
	1-810, gnl\|Hg17\|chr12 (8993588-8994422)
	1-810, gnl\|Mm7\|chr6 (122335017-122334217)