Non-Coding RNA Search

Ss1.1-rspl11_c8.5

Sequence:


               
               GATGCTTCTTAGTATATGGGAATGAATTCCTGGGACAAAAGGAGGAGCTTTCATCTCCTG
AAGAAAAATGAAAAACTGCTTAGAGAACTTAGGAACTTGGACTCAAGACAGTGCCGAGAG
ACACACAAGATTGCAGTATTTTATGTTGCTGAAGGACAAGAAGACAAACATTCCATTCTC
ACCAATACAGGAGGAAGTCAAGCATACGAAGACTTTGTAGCTGGTCTTGGTTGGGAGGTA
AATCTTACAAACCATTGTGGTTTCATGGGAGGACTACAAAAAAATAAAAGCACTGGATTG
ACCACACCATATTTTGCTACCTCTACAGTTGAAGTAATATTTCATGTATCAACAAGAATG
CCTTCTGATTCTGATGACTCTTTAACCAAAAAATTGAGACATTTAGGAAATGATGAAGTA
CACATTGTTTGGTCAGAGCACACTAGAGACTACAGGAGAGGAATTATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATGCTTCTTAGTATATGGGAATGAATTCCTGGGACAAAAGGAGGAGCTTTCATCTCCTG
AAGAAAAATGAAAAACTGCTTAGAGAACTTAGGAACTTGGACTCAAGACAGTGCCGAGAG
ACACACAAGATTGCAGTATTTTATGTTGCTGAAGGACAAGAAGACAAACATTCCATTCTC
ACCAATACAGGAGGAAGTCAAGCATACGAAGACTTTGTAGCTGGTCTTGGTTGGGAGGTA
AATCTTACAAACCATTGTGGTTTCATGGGAGGACTACAAAAAAATAAAAGCACTGGATTG
ACCACACCATATTTTGCTACCTCTACAGTTGAAGTAATATTTCATGTATCAACAAGAATG
CCTTCTGATTCTGATGACTCTTTAACCAAAAAATTGAGACATTTAGGAAATGATGAAGTA
CACATTGTTTGGTCAGAGCACACTAGAGACTACAGGAGAGGAATTATT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|12583642|emb|CAC27348.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|12583642|emb|CAC27348.1|

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               113-241, gnl|bosTau2|chr13 (24959055-24959183)
               

               
               113-241, gnl|Hg17|chr20 (20434179-20434051)
               

               
               113-241, gnl|Mm7|chr2 (146075473-146075345)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               113-241, gnl|bosTau2|chr13 (24959055-24959183)
               

               
               113-241, gnl|Hg17|chr20 (20434179-20434051)
               

               
               113-241, gnl|Mm7|chr2 (146075473-146075345)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               spl (0.143184)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)

	113-241, gnl\|bosTau2\|chr13 (24959055-24959183)
	113-241, gnl\|Hg17\|chr20 (20434179-20434051)
	113-241, gnl\|Mm7\|chr2 (146075473-146075345)