Non-Coding RNA Search

Ss1.1-rspl13_n3.5

Sequence:


               
               TTTTTTTTTTTTTTTTTTACCACAAAAACACCAACAACCCTGGTCCAGTTCAAAGAGGGT
CATGAGAGTTCAACCAGGGTGTGCGTGTACCTGCCGACATCCTAGGAAACGGAAGCCCCA
CCCCCCGGGGGAAGCGCCACCTCACCTACACTGTGCTTTGGAGAATTTGCCCTGGATCCC
AGTGACCCTCTGCAGAAAGGATGCATCCTGGGGAACAGGGAAACAATCAGCCATCGGGTC
ATCTGCTTCAGTCCTTCTGTATCTGGCAGACGCTTTGAAATGGGTGTGGGGACGTGAGGT
TGCTGTCCAGGTCAATGCCACCCATGTCTCAAAGACAAAAGTCTGAGTGATGATCGAACT
GAGGACATGAACTGGACCAAACCTTCCCACACTACTGTATCCAGCGGAATATTTGACACC
TCCCTCCAGAAAAGAAATGTTTCTAATGACACTGCAGCTCAGGGAGACAAGCATATGCTG
TTGGTACTGTGAAAGAATTTTAGAAATGGCCAAGAGAGTCTTTGCAAGTGGGGGTGACGA
TTTATTTATTTATTTCCCCTGGCTCTGGGCAGATCCGCTAGAGGAATCAGAAATGCAGAT
TTGATTCGCTGGTTTTCAAAATCTCTCACAAAATGTCCTTCCAAGATAACCGTTTCGTGC
AGAATTCGTCCTTTAATGGAGCTTCTTCAGGATTTAGAGAGTGTTGAGGAGAAGCCAGTT
AGTATTAGAAGACCGTCTCACTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTTTACCACAAAAACACCAACAACCCTGGTCCAGTTCAAAGAGGGT
CATGAGAGTTCAACCAGGGTGTGCGTGTACCTGCCGACATCCTAGGAAACGGAAGCCCCA
CCCCCCGGGGGAAGCGCCACCTCACCTACACTGTGCTTTGGAGAATTTGCCCTGGATCCC
AGTGACCCTCTGCAGAAAGGATGCATCCTGGGGAACAGGGAAACAATCAGCCATCGGGTC
ATCTGCTTCAGTCCTTCTGTATCTGGCAGACGCTTTGAAATGGGTGTGGGGACGTGAGGT
TGCTGTCCAGGTCAATGCCACCCATGTCTCAAAGACAAAAGTCTGAGTGATGATCGAACT
GAGGACATGAACTGGACCAAACCTTCCCACACTACTGTATCCAGCGGAATATTTGACACC
TCCCTCCAGAAAAGAAATGTTTCTAATGACACTGCAGCTCAGGGAGACAAGCATATGCTG
TTGGTACTGTGAAAGAATTTTAGAAATGGCCAAGAGAGTCTTTGCAAGTGGGGGTGACGA
TTTATTTATTTATTTCCCCTGGCTCTGGGCAGATCCGCTAGAGGAATCAGAAATGCAGAT
TTGATTCGCTGGTTTTCAAAATCTCTCACAAAATGTCCTTCCAAGATAACCGTTTCGTGC
AGAATTCGTCCTTTAATGGAGCTTCTTCAGGATTTAGAGAGTGTTGAGGAGAAGCCAGTT
AGTATTAGAAGACCGTCTCACTCA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               22-742, gnl|bosTau2|chr13 (18077195-18077915)
               

               
               22-742, gnl|Hg17|chr10 (15599147-15598368)
               

               
               22-742, gnl|Mm7|chr2 (12048257-12047548)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               22-742, gnl|bosTau2|chr13 (18077195-18077915)
               

               
               22-742, gnl|Hg17|chr10 (15599147-15598368)
               

               
               22-742, gnl|Mm7|chr2 (12048257-12047548)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               spl (0.143184)
               

               
               clu (0.119646)
               

               
               eje (0.0988338)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)
               

               
               clu (0.119646)
               

               
               eje (0.0988338)

	22-742, gnl\|bosTau2\|chr13 (18077195-18077915)
	22-742, gnl\|Hg17\|chr10 (15599147-15598368)
	22-742, gnl\|Mm7\|chr2 (12048257-12047548)