Non-Coding RNA Search

Ss1.1-rspl14_g16.5

Sequence:


               
               GGGACTTTCCCCAAACACAGATTCCAAAGGAAGCGACATAAACCAAGGCGCGTATCTCCT
CCTCTTACACAGCCTCTCAGCCAGTGGACCCTGCCTGCTTCTCTCTCTCAGTGCCCAGCA
CTCCGCATAGTGTCCTTCAAGTTGACAAACTTCCAAGGTGCAGGTGCTGGTCCCAGGAGC
CCAGCACCACGTGTTCCAAGTCATATGTCAGATTGTCAAGATCATCTCCTTCTCTATAGG
TTGACATTTAGCTTGATTAATACATACACCCAGAACTCAAAGGAAACCTGTTGCAAATAG
CTTAGATCCAAAGTGCATCTCTTTCCTAAGAATGATAGCACCCATAGTAAGACACCTTCT
TTGCATGGTATGGTAGCATGATTTTTGCTTGTGGGAAAACTCAATCTTTTATCAAAAGCT
CTTTGACTCCTCAATGGCTCTCTCTTGACACAGTAGTACTTAACAAGAACGTCTGGCTTT
AGAAAGCATAATTCTCCTTTCAGAAAACACTGACGTAGTAGCGTGTGTATTTGCTTACCA
TTTGCAAGCTGAAATCAGGATGGGGTGGGATCATGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGACTTTCCCCAAACACAGATTCCAAAGGAAGCGACATAAACCAAGGCGCGTATCTCCT
CCTCTTACACAGCCTCTCAGCCAGTGGACCCTGCCTGCTTCTCTCTCTCAGTGCCCAGCA
CTCCGCATAGTGTCCTTCAAGTTGACAAACTTCCAAGGTGCAGGTGCTGGTCCCAGGAGC
CCAGCACCACGTGTTCCAAGTCATATGTCAGATTGTCAAGATCATCTCCTTCTCTATAGG
TTGACATTTAGCTTGATTAATACATACACCCAGAACTCAAAGGAAACCTGTTGCAAATAG
CTTAGATCCAAAGTGCATCTCTTTCCTAAGAATGATAGCACCCATAGTAAGACACCTTCT
TTGCATGGTATGGTAGCATGATTTTTGCTTGTGGGAAAACTCAATCTTTTATCAAAAGCT
CTTTGACTCCTCAATGGCTCTCTCTTGACACAGTAGTACTTAACAAGAACGTCTGGCTTT
AGAAAGCATAATTCTCCTTTCAGAAAACACTGACGTAGTAGCGTGTGTATTTGCTTACCA
TTTGCAAGCTGAAATCAGGATGGGGTGGGATCATGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-576, gnl|bosTau2|chr19 (43699025-43699598)
               

               
               1-576, gnl|Hg17|chr17 (63120942-63121516)
               

               
               1-576, gnl|Mm7|chr11 (107319651-107319103)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-576, gnl|bosTau2|chr19 (43699025-43699598)
               

               
               1-576, gnl|Hg17|chr17 (63120942-63121516)
               

               
               1-576, gnl|Mm7|chr11 (107319651-107319103)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               spl (0.143184)
               

               
               sug (0.127291)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)
               

               
               sug (0.127291)

	1-576, gnl\|bosTau2\|chr19 (43699025-43699598)
	1-576, gnl\|Hg17\|chr17 (63120942-63121516)
	1-576, gnl\|Mm7\|chr11 (107319651-107319103)