Non-Coding RNA Search

Ss1.1-rspl16_d15.5

Sequence:


               
               GGGACTCAATGTTGAATGTGAAATGTGCAGCACAGGCCTTGGATAAAAGGGGTAAAGGTG
AGTGTTTTCTAGTGCATCTTGCTAGAATTTCAAAATTAACAAGTTTCAGTGACTGGCAGT
AATTGGGTTGAATATTATTTGCCTTGTAATACTGGTCATGCTGGTAGATAATAATATTTC
TGATAATTCTATTTTTAAAAATGGACTGGATGAATTCGTTTCTCAGAATTGAAATTGGAA
GTTCTCTCCGTGGCTCAGTGGTTAGCGAATCTGACCAGGAACCATGAGGTTGCCATGAGG
TTGCGGGTTTGATCCCTGGCCTTGCTCAGTGGGTTAAGGATCCAGCATTGCCGTGAGCTG
TGGTGTAGATCGCAGATGTGGCTCGGATTTGGTTTTGCTGTGGCTCGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGACTCAATGTTGAATGTGAAATGTGCAGCACAGGCCTTGGATAAAAGGGGTAAAGGTG
AGTGTTTTCTAGTGCATCTTGCTAGAATTTCAAAATTAACAAGTTTCAGTGACTGGCAGT
AATTGGGTTGAATATTATTTGCCTTGTAATACTGGTCATGCTGGTAGATAATAATATTTC
TGATAATTCTATTTTTAAAAATGGACTGGATGAATTCGTTTCTCAGAATTGAAATTGGAA
GTTCTCTCCGTGGCTCAGTGGTTAGCGAATCTGACCAGGAACCATGAGGTTGCCATGAGG
TTGCGGGTTTGATCCCTGGCCTTGCTCAGTGGGTTAAGGATCCAGCATTGCCGTGAGCTG
TGGTGTAGATCGCAGATGTGGCTCGGATTTGGTTTTGCTGTGGCTCGG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-239, gnl|bosTau2|chr16 (287369-287620)
               

               
               1-239, gnl|Hg17|chr1 (200550755-200551005)
               

               
               1-239, gnl|Mm7|chr1 (133525459-133525235)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-239, gnl|bosTau2|chr16 (287369-287620)
               

               
               1-239, gnl|Hg17|chr1 (200550755-200551005)
               

               
               1-239, gnl|Mm7|chr1 (133525459-133525235)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               spl (0.286369)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.286369)

	1-239, gnl\|bosTau2\|chr16 (287369-287620)
	1-239, gnl\|Hg17\|chr1 (200550755-200551005)
	1-239, gnl\|Mm7\|chr1 (133525459-133525235)