Non-Coding RNA Search

Ss1.1-rspl17_b8.5

Sequence:


               
               TGAGGGTCTTCAGTCCACTTCTGGTCAAGAGAAAGGACATGAACCAAGAGAATCTTGAGA
CTACAGGGTCCAGCAGGTCTACAATTCCTCATCTCTCCTAAGGTCCATGAGCCAGATAGG
AGGAGGACTATGGATAATGACTAAGAAACTCTGGGCTGCCAGGTGAAGATGCGTAGTCAG
GGAAAAGCAGCTACCAGGGTATTCTACACTCATCTTAAGTTGCCAAGTACATTCTGGCAC
ATCGAAAATGACACCTTTTTAACTCACCTCTTGGTGTGGGTCTGCTGTCTACCTCAGGAG
AATTTGTCTTTCACATGTATGGATGCAAAATGAGTATATAAGGGATGATAAAAGAGGATT
GGCTTGTATGATAAGCTAAAGAGACTGAAAGGCCAGTGTCGTGTTGGCAGCATCTTCTAA
ATGCATATCCTGAACCGCCAGGTGATGCTAACAGAGAAGCAAGGGAGATCTGGGGACACA
GGCCATTCCCTATACAGTATGCATATTTCCAGTGCAATTGCAGGTGTGTGTGTGTGTGTG
TGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATGAGAGGGAGAAAG
ACTAGAAGAGTTACGTAAGTAGAGAGAACGGGGAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAGGGTCTTCAGTCCACTTCTGGTCAAGAGAAAGGACATGAACCAAGAGAATCTTGAGA
CTACAGGGTCCAGCAGGTCTACAATTCCTCATCTCTCCTAAGGTCCATGAGCCAGATAGG
AGGAGGACTATGGATAATGACTAAGAAACTCTGGGCTGCCAGGTGAAGATGCGTAGTCAG
GGAAAAGCAGCTACCAGGGTATTCTACACTCATCTTAAGTTGCCAAGTACATTCTGGCAC
ATCGAAAATGACACCTTTTTAACTCACCTCTTGGTGTGGGTCTGCTGTCTACCTCAGGAG
AATTTGTCTTTCACATGTATGGATGCAAAATGAGTATATAAGGGATGATAAAAGAGGATT
GGCTTGTATGATAAGCTAAAGAGACTGAAAGGCCAGTGTCGTGTTGGCAGCATCTTCTAA
ATGCATATCCTGAACCGCCAGGTGATGCTAACAGAGAAGCAAGGGAGATCTGGGGACACA
GGCCATTCCCTATACAGTATGCATATTTCCAGTGCAATTGCAGGTGTGTGTGTGTGTGTG
TGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATGAGAGGGAGAAAG
ACTAGAAGAGTTACGTAAGTAGAGAGAACGGGGAGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               7-558, gnl|bosTau2|chr16 (29228763-29229332)
               

               
               7-558, gnl|Hg17|chr1 (169366889-169367444)
               

               
               7-558, gnl|Mm7|chr1 (161744008-161743454)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-558, gnl|bosTau2|chr16 (29228763-29229332)
               

               
               7-558, gnl|Hg17|chr1 (169366889-169367444)
               

               
               7-558, gnl|Mm7|chr1 (161744008-161743454)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               spl (0.143184)
               

               
               csk (0.140746)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)
               

               
               csk (0.140746)

	7-558, gnl\|bosTau2\|chr16 (29228763-29229332)
	7-558, gnl\|Hg17\|chr1 (169366889-169367444)
	7-558, gnl\|Mm7\|chr1 (161744008-161743454)