Non-Coding RNA Search

Ss1.1-rspl19_f13.5

Sequence:


               
               CATCCATGTGTGTTCAGGGCAGCAGTGGAGCCCAATCCAGGTGCCCATGTGTTTCTCAAC
TTAGCTCAGAGAAAGTAAAGGTAACTCCTTTCAAATCTGCTTCATTTAGCTCCAGCCTTT
TTCTGGTTTCACTTGCTGCCTTTTCTATTTTATGGGCATTTTTATATGGTAGCTTTCCCA
ACACAGCCAGAGGCCAGTGTGACAGAAGCCATGGCAAATGTTCCCTGTTTCACCCATCTG
GGAACATATTATTAAAACAATCAGCATCTTCTAATGGCCATCACTATCATATCTGTATTA
ATTTCAAGTTCATCTGAAGTCCTTAAATACAAGTGGAATGGTGTACGCACACTGCAAACT
TGCCTGCAAAAAAAGTTTCCTGTCTTTATAGTGTCGTGTTGCTTGGTCCTTTAAAAACAA
AAGCCAAACCAAACCTTCATACATGGCACACGGTCCAACAAAGCAGGGTTGGACCATTTG
GAACCTAGACATTTGAGGGCACTTGTGCAGGTCTGCATTAGAACAGAATTCAACTCCTTA
GGGCGCCCAGAGCTTTTGAGTCCCACAGGCCAGGTACAGAGCACACACTAGCTTTGGGAT
CCTTTAGAGAATGGTAGTTAAAATGTATCAACCACAAGTTGGATTTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATCCATGTGTGTTCAGGGCAGCAGTGGAGCCCAATCCAGGTGCCCATGTGTTTCTCAAC
TTAGCTCAGAGAAAGTAAAGGTAACTCCTTTCAAATCTGCTTCATTTAGCTCCAGCCTTT
TTCTGGTTTCACTTGCTGCCTTTTCTATTTTATGGGCATTTTTATATGGTAGCTTTCCCA
ACACAGCCAGAGGCCAGTGTGACAGAAGCCATGGCAAATGTTCCCTGTTTCACCCATCTG
GGAACATATTATTAAAACAATCAGCATCTTCTAATGGCCATCACTATCATATCTGTATTA
ATTTCAAGTTCATCTGAAGTCCTTAAATACAAGTGGAATGGTGTACGCACACTGCAAACT
TGCCTGCAAAAAAAGTTTCCTGTCTTTATAGTGTCGTGTTGCTTGGTCCTTTAAAAACAA
AAGCCAAACCAAACCTTCATACATGGCACACGGTCCAACAAAGCAGGGTTGGACCATTTG
GAACCTAGACATTTGAGGGCACTTGTGCAGGTCTGCATTAGAACAGAATTCAACTCCTTA
GGGCGCCCAGAGCTTTTGAGTCCCACAGGCCAGGTACAGAGCACACACTAGCTTTGGGAT
CCTTTAGAGAATGGTAGTTAAAATGTATCAACCACAAGTTGGATTTAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               107-648, gnl|bosTau2|chr6 (39119209-39119736)
               

               
               107-648, gnl|Hg17|chr4 (56136913-56136372)
               

               
               107-648, gnl|Mm7|chr5 (76143948-76143480)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               107-648, gnl|bosTau2|chr6 (39119209-39119736)
               

               
               107-648, gnl|Hg17|chr4 (56136913-56136372)
               

               
               107-648, gnl|Mm7|chr5 (76143948-76143480)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               spl (0.429553)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.429553)

	107-648, gnl\|bosTau2\|chr6 (39119209-39119736)
	107-648, gnl\|Hg17\|chr4 (56136913-56136372)
	107-648, gnl\|Mm7\|chr5 (76143948-76143480)