Non-Coding RNA Search

Ss1.1-rspl20_e24.5

Sequence:


               
               GACATTTCTGGGTTAAGTGTAACTTCTCATTGGTCAGAGAGCCACGGCGTGTTAAGCATG
GATACTGCGCTGCAAGACTTGAAGCTGTAAGACTAGAATGACACAGGTCAGTACTGCAAG
CAACATAGAGGGCCTGAAAGAAGGTGCACAGACTGTAGAAAAAATCCAATTTTTGATATT
TCAGTGATTCCAAAGAACATTCTAGTTTTGTTTTGTTTTTTCTTTTTAACTGCAGAGAGT
TGGTGGTATTTTCACATTCATGGTGTTTCTATCCAATTTCAGTACCCACATTTTGTGAGG
AAAAATTGTTTTAACAATGCAGGAGGAATTCTTAAATTAATTGCAATGTTAGACTGGAGA
AAATTTGGTATTTAGAGTATTTTTAAGGTACCATTGAATCAGGATTTTTTGTTTTTTGTT
TAAAAAAATTCTTTTTAATCAGTATTGTTTTTGGAAGTAATATACTTTGAAACTCTTAAC
TAATAGTCTCAAAAACTCTTAGAGGACAGTCTGAGAGCACGTATTCCTATTGTTTAAAAT
AAATACATGTTTTCGAATAGTAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACATTTCTGGGTTAAGTGTAACTTCTCATTGGTCAGAGAGCCACGGCGTGTTAAGCATG
GATACTGCGCTGCAAGACTTGAAGCTGTAAGACTAGAATGACACAGGTCAGTACTGCAAG
CAACATAGAGGGCCTGAAAGAAGGTGCACAGACTGTAGAAAAAATCCAATTTTTGATATT
TCAGTGATTCCAAAGAACATTCTAGTTTTGTTTTGTTTTTTCTTTTTAACTGCAGAGAGT
TGGTGGTATTTTCACATTCATGGTGTTTCTATCCAATTTCAGTACCCACATTTTGTGAGG
AAAAATTGTTTTAACAATGCAGGAGGAATTCTTAAATTAATTGCAATGTTAGACTGGAGA
AAATTTGGTATTTAGAGTATTTTTAAGGTACCATTGAATCAGGATTTTTTGTTTTTTGTT
TAAAAAAATTCTTTTTAATCAGTATTGTTTTTGGAAGTAATATACTTTGAAACTCTTAAC
TAATAGTCTCAAAAACTCTTAGAGGACAGTCTGAGAGCACGTATTCCTATTGTTTAAAAT
AAATACATGTTTTCGAATAGTAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-564, gnl|bosTau2|chr18 (24167921-24167359)
               

               
               5-564, gnl|Hg17|chr16 (55830796-55831369)
               

               
               5-564, gnl|Mm7|chr8 (93248250-93248800)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-564, gnl|bosTau2|chr18 (24167921-24167359)
               

               
               5-564, gnl|Hg17|chr16 (55830796-55831369)
               

               
               5-564, gnl|Mm7|chr8 (93248250-93248800)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               spl (0.143184)
               

               
               kid (0.129735)
               

               
               ret (0.128733)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)
               

               
               kid (0.129735)
               

               
               ret (0.128733)

	5-564, gnl\|bosTau2\|chr18 (24167921-24167359)
	5-564, gnl\|Hg17\|chr16 (55830796-55831369)
	5-564, gnl\|Mm7\|chr8 (93248250-93248800)