Ss1.1-rspl24_i16.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGGGCGCTTGTACTTTTTTTTCATGATGTGTGTGGCAGAGAGAACATATAAACAGAGAT TTTTATTTGCAAAACGGTTCAGCCATATTACTTCTGCCAGGAAAGCTAGGAAGTATGAAA TACCTCATTTCAGACTTAAAAAAGTGGAGAACATTAAGATATGGTTATCACTGCGTTCCT TTCTAAAGAGACGGGGCCCACAGCGTTCAGTGGACGTGGTTGTGTCTTCAGTCTTCCTAC TGACACTTTCCATTGCTTTCATTTGCTGTGCGCAGGTTCTCCGGGGACATAAAACTTTCC TGAATGATGTTTATAATTGGGAGTTCTTGATCTGGGAATCAGCTTTACTACTTTCCTTAC TGCGCCTAGCCTCATTGGGGTCTGAGGCCAATAAGACATACAGCGATG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGGGCGCTTGTACTTTTTTTTCATGATGTGTGTGGCAGAGAGAACATATAAACAGAGAT TTTTATTTGCAAAACGGTTCAGCCATATTACTTCTGCCAGGAAAGCTAGGAAGTATGAAA TACCTCATTTCAGACTTAAAAAAGTGGAGAACATTAAGATATGGTTATCACTGCGTTCCT TTCTAAAGAGACGGGGCCCACAGCGTTCAGTGGACGTGGTTGTGTCTTCAGTCTTCCTAC TGACACTTTCCATTGCTTTCATTTGCTGTGCGCAGGTTCTCCGGGGACATAAAACTTTCC TGAATGATGTTTATAATTGGGAGTTCTTGATCTGGGAATCAGCTTTACTACTTTCCTTAC TGCGCCTAGCCTCATTGGGGTCTGAGGCCAATAAGACATACAGCGATG |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 55-188, gnl|bosTau2|chr3 (24582162-24582295) | |
| 55-188, gnl|canFam2|chr17 (54612762-54612909) | |
| 55-188, gnl|danRer3|chrNA (67174189-67174049) | |
| 55-188, gnl|dasNov1|scaffold_91208 (2667-2538) | |
| 55-188, gnl|echTel1|scaffold_219087 (3767-3623) | |
| 55-188, gnl|fr1|chrUn (283108840-283108983) | |
| 55-188, gnl|galGal2|chr26 (2285187-2285325) | |
| 55-188, gnl|hg17|chr1 (113959322-113959469) | |
| 55-188, gnl|Hg17|chr1 (113959463-113959330) | |
| 55-188, gnl|loxAfr1|scaffold_136218 (1688-1835) | |
| 55-188, gnl|mm7|chr3 (103792797-103792650) | |
| 55-188, gnl|Mm7|chr3 (103792654-103792787) | |
| 55-188, gnl|monDom2|scaffold_0 (1440054-1439907) | |
| 55-188, gnl|oryCun1|scaffold_180740 (7863-7716) | |
| 55-188, gnl|panTro1|chr1 (113746805-113746952) | |
| 55-188, gnl|rheMac2|chr1 (116688865-116689012) | |
| 55-188, gnl|rn3|chr2 (199196222-199196075) | |
| 55-188, gnl|tetNig1|chr19 (3450746-3450893) | |
| 55-188, gnl|xenTro1|scaffold_61 (1365321-1365459) | |
| 257-408, gnl|bosTau2|chr3 (24594588-24594739) | |
| 257-408, gnl|canFam2|chr17 (54608487-54608667) | |
| 257-408, gnl|danRer3|chrNA (67178417-67178251) | |
| 257-408, gnl|dasNov1|scaffold_3473 (46529-46710) | |
| 257-408, gnl|echTel1|scaffold_219087 (7132-6952) | |
| 257-408, gnl|fr1|chrUn (283108319-283108486) | |
| 257-408, gnl|galGal2|chr26 (2284163-2284331) | |
| 257-408, gnl|hg17|chr1 (113955444-113955624) | |
| 257-408, gnl|Hg17|chr1 (113955632-113955481) | |
| 257-408, gnl|loxAfr1|scaffold_79994 (2315-2133) | |
| 257-408, gnl|mm7|chr3 (103797599-103797423) | |
| 257-408, gnl|Mm7|chr3 (103797413-103797563) | |
| 257-408, gnl|monDom2|scaffold_0 (1443080-1442906) | |
| 257-408, gnl|oryCun1|scaffold_181396 (5777-5943) | |
| 257-408, gnl|panTro1|chr1 (113742940-113743120) | |
| 257-408, gnl|rheMac2|chr1 (116685033-116685213) | |
| 257-408, gnl|rn3|chr2 (199200060-199199882) | |
| 257-408, gnl|tetNig1|chr19 (3450348-3450508) | |
| 257-408, gnl|xenTro1|scaffold_11 (1357026-1356856) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 55-188, gnl|bosTau2|chr3 (24582162-24582295) | |
| 55-188, gnl|canFam2|chr17 (54612762-54612909) | |
| 55-188, gnl|danRer3|chrNA (67174189-67174049) | |
| 55-188, gnl|dasNov1|scaffold_91208 (2667-2538) | |
| 55-188, gnl|echTel1|scaffold_219087 (3767-3623) | |
| 55-188, gnl|fr1|chrUn (283108840-283108983) | |
| 55-188, gnl|galGal2|chr26 (2285187-2285325) | |
| 55-188, gnl|hg17|chr1 (113959322-113959469) | |
| 55-188, gnl|Hg17|chr1 (113959463-113959330) | |
| 55-188, gnl|loxAfr1|scaffold_136218 (1688-1835) | |
| 55-188, gnl|mm7|chr3 (103792797-103792650) | |
| 55-188, gnl|Mm7|chr3 (103792654-103792787) | |
| 55-188, gnl|monDom2|scaffold_0 (1440054-1439907) | |
| 55-188, gnl|oryCun1|scaffold_180740 (7863-7716) | |
| 55-188, gnl|panTro1|chr1 (113746805-113746952) | |
| 55-188, gnl|rheMac2|chr1 (116688865-116689012) | |
| 55-188, gnl|rn3|chr2 (199196222-199196075) | |
| 55-188, gnl|tetNig1|chr19 (3450746-3450893) | |
| 55-188, gnl|xenTro1|scaffold_61 (1365321-1365459) | |
| 257-408, gnl|bosTau2|chr3 (24594588-24594739) | |
| 257-408, gnl|canFam2|chr17 (54608487-54608667) | |
| 257-408, gnl|danRer3|chrNA (67178417-67178251) | |
| 257-408, gnl|dasNov1|scaffold_3473 (46529-46710) | |
| 257-408, gnl|echTel1|scaffold_219087 (7132-6952) | |
| 257-408, gnl|fr1|chrUn (283108319-283108486) | |
| 257-408, gnl|galGal2|chr26 (2284163-2284331) | |
| 257-408, gnl|hg17|chr1 (113955444-113955624) | |
| 257-408, gnl|Hg17|chr1 (113955632-113955481) | |
| 257-408, gnl|loxAfr1|scaffold_79994 (2315-2133) | |
| 257-408, gnl|mm7|chr3 (103797599-103797423) | |
| 257-408, gnl|Mm7|chr3 (103797413-103797563) | |
| 257-408, gnl|monDom2|scaffold_0 (1443080-1442906) | |
| 257-408, gnl|oryCun1|scaffold_181396 (5777-5943) | |
| 257-408, gnl|panTro1|chr1 (113742940-113743120) | |
| 257-408, gnl|rheMac2|chr1 (116685033-116685213) | |
| 257-408, gnl|rn3|chr2 (199200060-199199882) | |
| 257-408, gnl|tetNig1|chr19 (3450348-3450508) | |
| 257-408, gnl|xenTro1|scaffold_11 (1357026-1356856) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| spl (0.143184) |