Non-Coding RNA Search

Ss1.1-rspl24_j4.5

Sequence:


               
               AATATGATATTACCCTCTCTGTCTCCTAATGTACACCCCTCCTTTTAACATCTCTAAAGG
TAGCCCCACTCACTAGTCACCTGGTCAAAAGCCTCTAACCCATCCCAAACCCTCCTCTCT
TCCCTTTCCTCTAACAACTGTATAAGAAAGGGGGTCTTACATGATTCTCTATGTTTAGAT
AATAAGATATATGTCAGATAAGAGAGGTCATTTCTGAGGACAACTGGGGAATCTGGAATT
AAGGAAGGGATAATTGCTTTTCAATTTATAATGTTTTCTACCGTGTAATGTGTGCTCGCA
GTGTATTAAACAAATGCTTAGTATAAAAATCATCCCTTGGAAATACTATGATTATAAAAT
AAAAGCAGATAACTGTACTGTATATTTGAAAGTTGCTAAGAGAGTACATCTTAAGTTTTC
ATCACAAGAAAAAAATTTATAATTATGTGTGGTGATGGATGTTAACTTATTGTAGTGATC
ATTTCATAATATATACTATACCAAAATGTTATGTTGTACACCCAAAACTAATACAATGTT
ACTTGTCAATTAAAAATAAATAAATGTGTATATATATGTGTGTGTATATATATATATATA
TGGCACATATATATATATAAATATGACCATATATATGTGTGTGTATATATATATGGCCAT
ATATATATATGGCATTGAGACGAGTCAGGAAAATTATGGGGGATAAAAAACTCTACAGGC
TCTGTGAGGGTTGAGATTTCTTCACCAGTGGATCCCAGGCACCTAAGGTAGTACCTCAAA
ACTGTTAAAAGACTGAATGAAACATTATCATGCCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATATGATATTACCCTCTCTGTCTCCTAATGTACACCCCTCCTTTTAACATCTCTAAAGG
TAGCCCCACTCACTAGTCACCTGGTCAAAAGCCTCTAACCCATCCCAAACCCTCCTCTCT
TCCCTTTCCTCTAACAACTGTATAAGAAAGGGGGTCTTACATGATTCTCTATGTTTAGAT
AATAAGATATATGTCAGATAAGAGAGGTCATTTCTGAGGACAACTGGGGAATCTGGAATT
AAGGAAGGGATAATTGCTTTTCAATTTATAATGTTTTCTACCGTGTAATGTGTGCTCGCA
GTGTATTAAACAAATGCTTAGTATAAAAATCATCCCTTGGAAATACTATGATTATAAAAT
AAAAGCAGATAACTGTACTGTATATTTGAAAGTTGCTAAGAGAGTACATCTTAAGTTTTC
ATCACAAGAAAAAAATTTATAATTATGTGTGGTGATGGATGTTAACTTATTGTAGTGATC
ATTTCATAATATATACTATACCAAAATGTTATGTTGTACACCCAAAACTAATACAATGTT
ACTTGTCAATTAAAAATAAATAAATGTGTATATATATGTGTGTGTATATATATATATATA
TGGCACATATATATATATAAATATGACCATATATATGTGTGTGTATATATATATGGCCAT
ATATATATATGGCATTGAGACGAGTCAGGAAAATTATGGGGGATAAAAAACTCTACAGGC
TCTGTGAGGGTTGAGATTTCTTCACCAGTGGATCCCAGGCACCTAAGGTAGTACCTCAAA
ACTGTTAAAAGACTGAATGAAACATTATCATGCCAT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q9D1W2_MOUSE

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q9D1W2_MOUSE

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               5-312, gnl|bosTau2|chr1 (39716007-39715709)
               

               
               5-312, gnl|Hg17|chr3 (123322731-123322993)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-312, gnl|bosTau2|chr1 (39716007-39715709)
               

               
               5-312, gnl|Hg17|chr3 (123322731-123322993)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               mga (0.160205)
               

               
               spl (0.143184)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mga (0.160205)
               

               
               spl (0.143184)

	5-312, gnl\|bosTau2\|chr1 (39716007-39715709)
	5-312, gnl\|Hg17\|chr3 (123322731-123322993)