Non-Coding RNA Search

Ss1.1-rspl24_o24.5

Sequence:


               
               AGGTTAGGGACACGTGAACCATAGGTAGTATAGGGGGGAAGAAAAACACTCATCTGGAAG
TCAGGAGGTTTGGGTCCTAGTCCAAGCTCTGGAAGTTACTATACGACCTTGGGCAGGTCA
CCTAATGACTCTGAAATTCACCATCAATCAAATGAGAGTTTTCTAAGTCTTAACATTTCT
TCTTCTCTGTAGTTCTCTGACTCTCACTTCTAAAAATCCTCAAGGAGGTGATTTTATCGT
CTTTTTAAAGATATCTTTTTAATCAATACCCATGAAAGTTTCTTTGTGTATATATTTCTC
CCACTTTTACATTTTTTATCACATTTTAACTTATTCAGAGGAGCTCTGGTCAGTATTTCC
TTTTATCCTGTTGACAACAACTCTAATGGCTGGCCTTTCTTGTATGCAATGAGCCAACAT
TCTTTTTTGTTTTATATTTTCCCTTTCCTTTTCCTGGACAAAGCATATTGAAATCTTTTT
TTTTTTTTTTTTAATAATTTTTTT------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------GAGTGAAATCGTGAGTGAACCCAAAGAAATGTTTCTGCCTTCAGAGTG
AGTAGGCATGAGTGTGGGTGAAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGTTAGGGACACGTGAACCATAGGTAGTATAGGGGGGAAGAAAAACACTCATCTGGAAG
TCAGGAGGTTTGGGTCCTAGTCCAAGCTCTGGAAGTTACTATACGACCTTGGGCAGGTCA
CCTAATGACTCTGAAATTCACCATCAATCAAATGAGAGTTTTCTAAGTCTTAACATTTCT
TCTTCTCTGTAGTTCTCTGACTCTCACTTCTAAAAATCCTCAAGGAGGTGATTTTATCGT
CTTTTTAAAGATATCTTTTTAATCAATACCCATGAAAGTTTCTTTGTGTATATATTTCTC
CCACTTTTACATTTTTTATCACATTTTAACTTATTCAGAGGAGCTCTGGTCAGTATTTCC
TTTTATCCTGTTGACAACAACTCTAATGGCTGGCCTTTCTTGTATGCAATGAGCCAACAT
TCTTTTTTGTTTTATATTTTCCCTTTCCTTTTCCTGGACAAAGCATATTGAAATCTTTTT
TTTTTTTTTTTTAATAATTTTTTT------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------GAGTGAAATCGTGAGTGAACCCAAAGAAATGTTTCTGCCTTCAGAGTG
AGTAGGCATGAGTGTGGGTGAAAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               49-475, gnl|bosTau2|chr3 (63698961-63699393)
               

               
               49-475, gnl|Hg17|chr1 (52266359-52267084)
               

               
               49-475, gnl|Mm7|chr4 (108191429-108190853)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               49-475, gnl|bosTau2|chr3 (63698961-63699393)
               

               
               49-475, gnl|Hg17|chr1 (52266359-52267084)
               

               
               49-475, gnl|Mm7|chr4 (108191429-108190853)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               spl (0.143184)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)

	49-475, gnl\|bosTau2\|chr3 (63698961-63699393)
	49-475, gnl\|Hg17\|chr1 (52266359-52267084)
	49-475, gnl\|Mm7\|chr4 (108191429-108190853)