Non-Coding RNA Search

Ss1.1-rspl25_k21.5S

Sequence:


               
               TACTTGTTTTCCCACTGGAAGAAGTAAGTTTTAGGCAGTAGTTAACCTTGCAGCATTTGT
ATTTACAGTTTACAGTTCCAGAAGTTGCGTCGAAATGGATTACATAACTGCTCTTTTTTG
TTTTACCCTGGTGTTTTACATCTGTCCCAGGCTGACATCTGCTCTTGGCTGGCCCACTTT
GGTATGGGCTTTAAATTCACTACCCCAAACACAATATACTGTCATCTGCTTTAAAAAAGT
AATGCTCAAGACACCTGATAAAATCTCATTTTGCAGCCAGACAAGCCTTGAATCCTTTTG
GCACTAACTGCAAAGGAAGATTTTTTTCTCTAGATATTGATTAGCAGCTAGTGCTCCAAT
TAGAAGCACGAACTATAACCATGATAAGTAAACAGCAGCTGATGGTTAAGTGGATCATCA
TGTTCAGTATTTCATGCAGCATATGAGAAACAAGTCTAATTGCTGATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACTTGTTTTCCCACTGGAAGAAGTAAGTTTTAGGCAGTAGTTAACCTTGCAGCATTTGT
ATTTACAGTTTACAGTTCCAGAAGTTGCGTCGAAATGGATTACATAACTGCTCTTTTTTG
TTTTACCCTGGTGTTTTACATCTGTCCCAGGCTGACATCTGCTCTTGGCTGGCCCACTTT
GGTATGGGCTTTAAATTCACTACCCCAAACACAATATACTGTCATCTGCTTTAAAAAAGT
AATGCTCAAGACACCTGATAAAATCTCATTTTGCAGCCAGACAAGCCTTGAATCCTTTTG
GCACTAACTGCAAAGGAAGATTTTTTTCTCTAGATATTGATTAGCAGCTAGTGCTCCAAT
TAGAAGCACGAACTATAACCATGATAAGTAAACAGCAGCTGATGGTTAAGTGGATCATCA
TGTTCAGTATTTCATGCAGCATATGAGAAACAAGTCTAATTGCTGATT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-449, gnl|bosTau2|chr1 (52249024-52249462)
               

               
               1-449, gnl|Hg17|chr3 (184655219-184655653)
               

               
               1-449, gnl|Mm7|chr16 (22771320-22771755)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-449, gnl|bosTau2|chr1 (52249024-52249462)
               

               
               1-449, gnl|Hg17|chr3 (184655219-184655653)
               

               
               1-449, gnl|Mm7|chr16 (22771320-22771755)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               fbs (0.175346)
               

               
               spl (0.143184)
               

               
               nmm (0.132802)
               

               
               pgl (0.118483)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.175346)
               

               
               spl (0.143184)
               

               
               nmm (0.132802)
               

               
               pgl (0.118483)

	1-449, gnl\|bosTau2\|chr1 (52249024-52249462)
	1-449, gnl\|Hg17\|chr3 (184655219-184655653)
	1-449, gnl\|Mm7\|chr16 (22771320-22771755)