Non-Coding RNA Search

Ss1.1-rspl25_n6.5

Sequence:


               
               TCCGTAGGAGGCCTCAGTTGTCTCATCATTGTGCCTATCTAGGTCTCACAGATGATGCAC
TTAATTGTTATAGCAATTACTATAAAAATGAAGGCTGCTTAAATTGTGTACCTTTTAACA
GTAGCATTTGTTATTTTATTCAAAACACTAAAGATTTAATTTTATAATAGTTTTGTCCAT
TAAAGTTTGTTTTAAAATATATATTGGCAACAACTTAAATCCCTCAAAATAAAATACTAT
GTGGTTTTATTTTCATCTACCATTTTTACCTCTTTTAGGGGTCATCTAGAAGATTAAAAT
TTAGCTTTATTTTTCTGAACCGCATATAATTAACTTATAAAATGCAAATGTTTACTAATT
CACTGTGTAGTATTTAGAAATCATGGTGATATAATAGTTAATGGTGTCAGAGCCCCATTT
GCTTGGGGGTGAAGTTCAAGAAGACACAGCCTGTTGAACTTGCGTTTCCTTGGAGAAGAA
GGTAAGAAATTTATAAATATGTCATTAATTTTACATTTATTACATTATTGGTCACTGTTA
ATAACATTTGCTTCACTTTTTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCGTAGGAGGCCTCAGTTGTCTCATCATTGTGCCTATCTAGGTCTCACAGATGATGCAC
TTAATTGTTATAGCAATTACTATAAAAATGAAGGCTGCTTAAATTGTGTACCTTTTAACA
GTAGCATTTGTTATTTTATTCAAAACACTAAAGATTTAATTTTATAATAGTTTTGTCCAT
TAAAGTTTGTTTTAAAATATATATTGGCAACAACTTAAATCCCTCAAAATAAAATACTAT
GTGGTTTTATTTTCATCTACCATTTTTACCTCTTTTAGGGGTCATCTAGAAGATTAAAAT
TTAGCTTTATTTTTCTGAACCGCATATAATTAACTTATAAAATGCAAATGTTTACTAATT
CACTGTGTAGTATTTAGAAATCATGGTGATATAATAGTTAATGGTGTCAGAGCCCCATTT
GCTTGGGGGTGAAGTTCAAGAAGACACAGCCTGTTGAACTTGCGTTTCCTTGGAGAAGAA
GGTAAGAAATTTATAAATATGTCATTAATTTTACATTTATTACATTATTGGTCACTGTTA
ATAACATTTGCTTCACTTTTTTTT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               162-561, gnl|bosTau2|chr11 (18852733-18852333)
               

               
               162-561, gnl|Hg17|chr2 (37405848-37404967)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               162-561, gnl|bosTau2|chr11 (18852733-18852333)
               

               
               162-561, gnl|Hg17|chr2 (37405848-37404967)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               liv (0.146284)
               

               
               spl (0.143184)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)
               

               
               spl (0.143184)

	162-561, gnl\|bosTau2\|chr11 (18852733-18852333)
	162-561, gnl\|Hg17\|chr2 (37405848-37404967)