Ss1.1-rspl26_n23.5
|
CGTCCTTCTGCTCACCACGGTCAGAGTGAGCAGTCAGTGAGTCTTCCCACGTGCTGACAC
TTAACACTTGGTTTATCGGCAAAGACTCATAGAAGGGTGAGCAGCCCCTCTGGCCTTCAG
ATAAAAAAAAGAGCTACCCACTGTCAGAAAATGTCACTACAGATGATAACAGTTGGTAAT
AACATGGCCTTAATTCAGCCAGGCTTCTCATTGATGAATTTTGATGGGCAAATCTTCTTC
TTTGGCCAAAAAGGCTGGCCCAAGAGGTCCTGCCCCACTGGAGTTTTTCATTTTGATGTA
AAGCATAACCATCTCAAACTGAAGCCTGCACTTTTCTCTAAAGATTCCTGCTACCTTCCT
CCTCTCCGCTACCCAGCCACTTGCACATTCAAAAGCAGCTTATAGTCTGAAAAACATCAG
TACATCATCCATGGAGGGAAAACACCAAATAATGAGCTTTCGGATAAGATTTATGTCATG
TCTGTGGTTTGCAAGAACAACAAAAAAGTTACTTTTCGCTGCAGAGAGAAAGACTTGGTA
GGAGATGTTCCTGAAGGCAGATATGGTCATTCCATTGATGTCGTGTATAGTCGAGGGAAA
AGTATGGGTGTTCTCTTTGGAGGACGGTCATACATCCCTTCTGCTCAAAGAACCACAGAA
AAATGGAATAGTGTAGCTGACTGCCTGCCCCACATTTTCTTGGTAGATTTTGAATTTGGT
TGCTCTACATCATACATTCTTCCAGAACTTCAAGATGGGCTATCTTTTCATGTCTCCATT
GCCAGAAATGATACCATTTATATTTTAGGAGGACACTCACTTGCCAATAACATCCGTCCT
GCCAATCTATATAAAATAAGGGTTGATCTCCCCCTGGGTAGCCCAGCTGTGACTTGCACA
GTCCTGCCAGGAGGAATCTCTGTCTCCAGTGCAATCCTGACTCAAACGAGCAGTGATGAA
TTTGTTATTGTTGGTGGCTATCAGCTTGAAAATCAAAAAAGAATGGTCTGCAACATCATC
TCTTTCAAGGACAACAAGATAGGAATTCATGAGATGGAAACTCCAGATTGGACCCCAGAT
ATTAAGCACAGCAAGATATGGTTTGGAAGCAACATGGGAAATGGAACCGTTTTCCTTGGC
ATACCAGGAGACAATAAACAGGCTCTTTCAGAAGCATTCTATTTCTATACATTGAAATGT
ACTGAAGACGATGTGAACGAAGATCAAAAAACATTCACAAATAGTCAGACATCAACAGAA
GATCCAGGGGACTCCACTCCCTTTGAAGACTCAGAAGAATTTTGTTTCAGTGCAGAAGCA
AATAGTTTTGATGGTGATGATGAATTTGACACCTATAACGAAGATGATGAGGAAGATGAG
TCTGAGACGGGCTACTGGATTACATGCTGCCCTACTTGTGATATGGATATCAACACTTGG
GTACCATTTTATTCAACTGAGCTCAACAAACCTGCCATGATCTACTGCTCTCATGGAGAT
GGGCATTGGGTCCATGCCCAGTGCATGGATCTGGCAGAACACACACTCATCCATCTGTCA
GAAGGAAGCAGCAAGTATTACTGCAAGGAGCATGTGGAGATAGCAAGAGCACTGCAAACC |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CGTCCTTCTGCTCACCACGGTCAGAGTGAGCAGTCAGTGAGTCTTCCCACGTGCTGACAC
TTAACACTTGGTTTATCGGCAAAGACTCATAGAAGGGTGAGCAGCCCCTCTGGCCTTCAG
ATAAAAAAAAGAGCTACCCACTGTCAGAAAATGTCACTACAGATGATAACAGTTGGTAAT
AACATGGCCTTAATTCAGCCAGGCTTCTCATTGATGAATTTTGATGGGCAAATCTTCTTC
TTTGGCCAAAAAGGCTGGCCCAAGAGGTCCTGCCCCACTGGAGTTTTTCATTTTGATGTA
AAGCATAACCATCTCAAACTGAAGCCTGCACTTTTCTCTAAAGATTCCTGCTACCTTCCT
CCTCTCCGCTACCCAGCCACTTGCACATTCAAAAGCAGCTTATAGTCTGAAAAACATCAG
TACATCATCCATGGAGGGAAAACACCAAATAATGAGCTTTCGGATAAGATTTATGTCATG
TCTGTGGTTTGCAAGAACAACAAAAAAGTTACTTTTCGCTGCAGAGAGAAAGACTTGGTA
GGAGATGTTCCTGAAGGCAGATATGGTCATTCCATTGATGTCGTGTATAGTCGAGGGAAA
AGTATGGGTGTTCTCTTTGGAGGACGGTCATACATCCCTTCTGCTCAAAGAACCACAGAA
AAATGGAATAGTGTAGCTGACTGCCTGCCCCACATTTTCTTGGTAGATTTTGAATTTGGT
TGCTCTACATCATACATTCTTCCAGAACTTCAAGATGGGCTATCTTTTCATGTCTCCATT
GCCAGAAATGATACCATTTATATTTTAGGAGGACACTCACTTGCCAATAACATCCGTCCT
GCCAATCTATATAAAATAAGGGTTGATCTCCCCCTGGGTAGCCCAGCTGTGACTTGCACA
GTCCTGCCAGGAGGAATCTCTGTCTCCAGTGCAATCCTGACTCAAACGAGCAGTGATGAA
TTTGTTATTGTTGGTGGCTATCAGCTTGAAAATCAAAAAAGAATGGTCTGCAACATCATC
TCTTTCAAGGACAACAAGATAGGAATTCATGAGATGGAAACTCCAGATTGGACCCCAGAT
ATTAAGCACAGCAAGATATGGTTTGGAAGCAACATGGGAAATGGAACCGTTTTCCTTGGC
ATACCAGGAGACAATAAACAGGCTCTTTCAGAAGCATTCTATTTCTATACATTGAAATGT
ACTGAAGACGATGTGAACGAAGATCAAAAAACATTCACAAATAGTCAGACATCAACAGAA
GATCCAGGGGACTCCACTCCCTTTGAAGACTCAGAAGAATTTTGTTTCAGTGCAGAAGCA
AATAGTTTTGATGGTGATGATGAATTTGACACCTATAACGAAGATGATGAGGAAGATGAG
TCTGAGACGGGCTACTGGATTACATGCTGCCCTACTTGTGATATGGATATCAACACTTGG
GTACCATTTTATTCAACTGAGCTCAACAAACCTGCCATGATCTACTGCTCTCATGGAGAT
GGGCATTGGGTCCATGCCCAGTGCATGGATCTGGCAGAACACACACTCATCCATCTGTCA
GAAGGAAGCAGCAAGTATTACTGCAAGGAGCATGTGGAGATAGCAAGAGCACTGCAAACC |
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gi|27544468|dbj|BAC54967.1| |
Protein identifier
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gi|27544468|dbj|BAC54967.1| |
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164-283, - strand, RNAz p=0.78267 |
|
524-723, - strand, RNAz p=0.99567 |
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844-963, - strand, RNAz p=0.57225 |
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1084-1203, - strand, RNAz p=0.776832 |
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1244-1363, - strand, RNAz p=0.616007 |
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1404-1619, + strand, RNAz p=0.990353 |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
164-283, - strand, RNAz p=0.78267 |
|
524-723, - strand, RNAz p=0.99567 |
|
844-963, - strand, RNAz p=0.57225 |
|
1084-1203, - strand, RNAz p=0.776832 |
|
1244-1363, - strand, RNAz p=0.616007 |
|
1404-1619, + strand, RNAz p=0.990353 |
|
3' of BC037344, - |
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3' of NM_000536, + |
Human gene identifier and UTR site,
human gene reading direction
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3' of BC037344, - |
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3' of NM_000536, + |
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3-123, gnl|bosTau2|chr15 (41150414-41150534) |
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3-123, gnl|canFam2|chr18 (34634779-34634089) |
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3-123, gnl|dasNov1|scaffold_24256 (38471-39069) |
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3-123, gnl|echTel1|scaffold_303674 (81052-80363) |
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3-123, gnl|hg17|chr11 (36575933-36576579) |
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3-123, gnl|Hg17|chr11 (36576346-36576225) |
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3-123, gnl|loxAfr1|scaffold_897 (137200-137848) |
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3-123, gnl|mm7|chr2 (101475865-101475226) |
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3-123, gnl|Mm7|chr2 (101475477-101475589) |
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3-123, gnl|monDom2|scaffold_33 (1711628-1712304) |
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3-123, gnl|oryCun1|scaffold_213981 (25651-24998) |
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3-123, gnl|panTro1|chr9 (37001932-37002582) |
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3-123, gnl|rheMac2|chr14 (35246424-35245764) |
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3-123, gnl|rn3|chr3 (86661655-86661020) |
| |
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127-1619, gnl|bosTau2|chr15 (41155724-41157218) |
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127-1619, gnl|Hg17|chr11 (36572319-36570826) |
|
127-1619, gnl|Mm7|chr2 (101480040-101481531) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
3-123, gnl|bosTau2|chr15 (41150414-41150534) |
|
3-123, gnl|canFam2|chr18 (34634779-34634089) |
|
3-123, gnl|dasNov1|scaffold_24256 (38471-39069) |
|
3-123, gnl|echTel1|scaffold_303674 (81052-80363) |
|
3-123, gnl|hg17|chr11 (36575933-36576579) |
|
3-123, gnl|Hg17|chr11 (36576346-36576225) |
|
3-123, gnl|loxAfr1|scaffold_897 (137200-137848) |
|
3-123, gnl|mm7|chr2 (101475865-101475226) |
|
3-123, gnl|Mm7|chr2 (101475477-101475589) |
|
3-123, gnl|monDom2|scaffold_33 (1711628-1712304) |
|
3-123, gnl|oryCun1|scaffold_213981 (25651-24998) |
|
3-123, gnl|panTro1|chr9 (37001932-37002582) |
|
3-123, gnl|rheMac2|chr14 (35246424-35245764) |
|
3-123, gnl|rn3|chr3 (86661655-86661020) |
| |
|
127-1619, gnl|bosTau2|chr15 (41155724-41157218) |
|
127-1619, gnl|Hg17|chr11 (36572319-36570826) |
|
127-1619, gnl|Mm7|chr2 (101480040-101481531) |
