Ss1.1-rspl26_p5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTCTAAAACAATGATTGCAAAGGCTTTGGCTAATGAGAGTGGGCTGAACTTCCTAGCTAT AAAGGGACCTGAATTAATGAATAAATATGTTGGTGAATCTGAAAGAGCAGTTAGAGAGAT CTTCCGAAAAGCAAGAGCAGTGGCTCCTTCCATTATTTTCTTTGATGAACTTGATGCCTT AGCAGTTGAAAGGGGCAGTTCTTCAGGTGCTGGGAATGTAGCCGATCGTGTTTTGGCTCA GCTCTTGACGGAAATGGATGGCATTGAACAGTTAAAGGATGTGACAATTTTGGCAGCTAC TAACCGCCCAGATAGGATAGACAAGGCTTTGATGCGGCCTGGAAGAATTGATAGAATCAT CTATGTGCCTTTACCAGATGCAGCAACAAGAAGGGAAATATTTAACCTGCAGTTTCACTC TATGCCAATTAGTAAAGAGGTTGATCTGAATGAACTCGTCCTCCAAACAGATACATACTC AGGAGCAGAGATTATAGCCGTCTGTAGAGAGGCAGCCCTTCTGGCTCTGGAAGAAGACAT TCAAGCCAACTGCATTATGAAAAGACACTTTACTCAAGCCTTGAGCACCGTGACACCCAG ACTTCCTGAGTCATTGAGACGTTTCTATGAAGATTATCAAGAGAAGAGTGGGCTGCATAC ACTCTGAGAAAATATACATATTCATTATGCTAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTCTAAAACAATGATTGCAAAGGCTTTGGCTAATGAGAGTGGGCTGAACTTCCTAGCTAT AAAGGGACCTGAATTAATGAATAAATATGTTGGTGAATCTGAAAGAGCAGTTAGAGAGAT CTTCCGAAAAGCAAGAGCAGTGGCTCCTTCCATTATTTTCTTTGATGAACTTGATGCCTT AGCAGTTGAAAGGGGCAGTTCTTCAGGTGCTGGGAATGTAGCCGATCGTGTTTTGGCTCA GCTCTTGACGGAAATGGATGGCATTGAACAGTTAAAGGATGTGACAATTTTGGCAGCTAC TAACCGCCCAGATAGGATAGACAAGGCTTTGATGCGGCCTGGAAGAATTGATAGAATCAT CTATGTGCCTTTACCAGATGCAGCAACAAGAAGGGAAATATTTAACCTGCAGTTTCACTC TATGCCAATTAGTAAAGAGGTTGATCTGAATGAACTCGTCCTCCAAACAGATACATACTC AGGAGCAGAGATTATAGCCGTCTGTAGAGAGGCAGCCCTTCTGGCTCTGGAAGAAGACAT TCAAGCCAACTGCATTATGAAAAGACACTTTACTCAAGCCTTGAGCACCGTGACACCCAG ACTTCCTGAGTCATTGAGACGTTTCTATGAAGATTATCAAGAGAAGAGTGGGCTGCATAC ACTCTGAGAAAATATACATATTCATTATGCTAAAAA |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 196-326, gnl|bosTau2|chr17 (19198520-19198390) | |
| 196-326, gnl|canFam2|chr19 (20260949-20260859) | |
| 196-326, gnl|dasNov1|scaffold_157827 (1391-1478) | |
| 196-326, gnl|echTel1|scaffold_286026 (79843-79753) | |
| 196-326, gnl|fr1|chrUn (28036986-28036896) | |
| 196-326, gnl|galGal2|chr4 (54046743-54046653) | |
| 196-326, gnl|hg17|chr4 (124369337-124369427) | |
| 196-326, gnl|Hg17|chr4 (124369336-124369466) | |
| 196-326, gnl|loxAfr1|scaffold_215168 (214-124) | |
| 196-326, gnl|mm7|chr3 (37275311-37275401) | |
| 196-326, gnl|Mm7|chr3 (37275310-37275440) | |
| 196-326, gnl|oryCun1|scaffold_213664 (522955-522865) | |
| 196-326, gnl|panTro1|chr3 (141197211-141197301) | |
| 196-326, gnl|rheMac2|chr5 (115433391-115433481) | |
| 196-326, gnl|rn3|chr2 (123968627-123968717) | |
| 196-326, gnl|tetNig1|chrUn_random (112665686-112665776) | |
| 196-326, gnl|xenTro1|scaffold_762 (212634-212542) | |
| 489-696, gnl|bosTau2|chr17 (19443681-19443888) | |
| 489-696, gnl|Hg17|chr4 (124592646-124592853) | |
| 489-696, gnl|Mm7|chr3 (37389531-37389727) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 196-326, gnl|bosTau2|chr17 (19198520-19198390) | |
| 196-326, gnl|canFam2|chr19 (20260949-20260859) | |
| 196-326, gnl|dasNov1|scaffold_157827 (1391-1478) | |
| 196-326, gnl|echTel1|scaffold_286026 (79843-79753) | |
| 196-326, gnl|fr1|chrUn (28036986-28036896) | |
| 196-326, gnl|galGal2|chr4 (54046743-54046653) | |
| 196-326, gnl|hg17|chr4 (124369337-124369427) | |
| 196-326, gnl|Hg17|chr4 (124369336-124369466) | |
| 196-326, gnl|loxAfr1|scaffold_215168 (214-124) | |
| 196-326, gnl|mm7|chr3 (37275311-37275401) | |
| 196-326, gnl|Mm7|chr3 (37275310-37275440) | |
| 196-326, gnl|oryCun1|scaffold_213664 (522955-522865) | |
| 196-326, gnl|panTro1|chr3 (141197211-141197301) | |
| 196-326, gnl|rheMac2|chr5 (115433391-115433481) | |
| 196-326, gnl|rn3|chr2 (123968627-123968717) | |
| 196-326, gnl|tetNig1|chrUn_random (112665686-112665776) | |
| 196-326, gnl|xenTro1|scaffold_762 (212634-212542) | |
| 489-696, gnl|bosTau2|chr17 (19443681-19443888) | |
| 489-696, gnl|Hg17|chr4 (124592646-124592853) | |
| 489-696, gnl|Mm7|chr3 (37389531-37389727) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| spl (0.286369) | |
| hea (0.204499) | |
| ecc (0.115035) |