Non-Coding RNA Search

Ss1.1-rspl27_c17.5

Sequence:


               
               TTCTTAACCTGCTGAGCCACAACGGGAACTCCTAATAATTTTCTTTCCTATGAGAATGCA
GGTTTGCCATGTGCATCCGTAGTTGAAGCTATGTACTTCATGGTAGATGTAAAAGAGACG
TATTTCTTACAGGAGAGACTTCCTGTAGAGAAGTCTTATGTGAGTCTATACATAAATAGT
TTCACTTAAATTTTGCAGTTTAAAATCTTAAAGGAGGTTTAATTGACACTTATTATGCCA
ATTAAGCTTGGAATGGGGCAATGGATGCATTTCCCAAAATGTCTGAAAGCACTAACAGCT
TACACTGCTGAGCGAGAACCTCCTGGGTGTAATTTAGCCACTTAGGGAGCTGCGTTAACA
TTCCCAGGCCATTATGATGCTGTTATGGCTTCAGCGTGCTAATGTGTGAGTGTTCATTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCTTAACCTGCTGAGCCACAACGGGAACTCCTAATAATTTTCTTTCCTATGAGAATGCA
GGTTTGCCATGTGCATCCGTAGTTGAAGCTATGTACTTCATGGTAGATGTAAAAGAGACG
TATTTCTTACAGGAGAGACTTCCTGTAGAGAAGTCTTATGTGAGTCTATACATAAATAGT
TTCACTTAAATTTTGCAGTTTAAAATCTTAAAGGAGGTTTAATTGACACTTATTATGCCA
ATTAAGCTTGGAATGGGGCAATGGATGCATTTCCCAAAATGTCTGAAAGCACTAACAGCT
TACACTGCTGAGCGAGAACCTCCTGGGTGTAATTTAGCCACTTAGGGAGCTGCGTTAACA
TTCCCAGGCCATTATGATGCTGTTATGGCTTCAGCGTGCTAATGTGTGAGTGTTCATTCT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               140-420, gnl|bosTau2|chr14 (49903588-49903311)
               

               
               140-420, gnl|Hg17|chr8 (82833909-82834205)
               

               
               140-420, gnl|Mm7|chr3 (10398570-10399017)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               140-420, gnl|bosTau2|chr14 (49903588-49903311)
               

               
               140-420, gnl|Hg17|chr8 (82833909-82834205)
               

               
               140-420, gnl|Mm7|chr3 (10398570-10399017)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               sin (0.174948)
               

               
               spl (0.143184)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sin (0.174948)
               

               
               spl (0.143184)

	140-420, gnl\|bosTau2\|chr14 (49903588-49903311)
	140-420, gnl\|Hg17\|chr8 (82833909-82834205)
	140-420, gnl\|Mm7\|chr3 (10398570-10399017)