Non-Coding RNA Search

Ss1.1-rspl30_o9.5

Sequence:


               
               ATTTTGTTTGCAAGATTAGCACTGCAGACTATTCCAGAAGACTTGGACTTACGAGATGAC
AGTCTGCTTAAAAATTTAGATATAAGATGTATAAGAAGTCTTAACGGTATGTAAAACCTA
CTTCCTTTTGCATAGTAGCAATTTTGGTCAAATATGAAGTACTTTTTAACTCGTTTTATA
ATGAAGCTTTTAATAGCCACATAGTTTATCTATAGTGAGTTAAATAAAATGAGCTTTACT
TAATAGTTAAATGACAGAAGGGTATCTGATAATTTGTCACATTCATTGATGTCTTGCACT
GTTATTTCTTTTCTTCCTGGTGCATTTAAGGACTGTCTGACATTTGTACTCTTGCTATTG
GTTTAGGCTTTGCTGTGTAAATCTAGTTAGGTTTTTTTTTTTTTTTTTTCCCATCTTTTT
AGGGCTGTACCCGAGGTGTGTGGAGGTTCTCAGCCTAGGCATCTAATCTGAGCTGTAGCT
GCCGGCCTCCGCCACAGCAATGATAGATCTGAGCTGCGTCTGCAGCCTGCACCACAGCCC
ACGGCAACACTGGCTCCATGACCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTTGTTTGCAAGATTAGCACTGCAGACTATTCCAGAAGACTTGGACTTACGAGATGAC
AGTCTGCTTAAAAATTTAGATATAAGATGTATAAGAAGTCTTAACGGTATGTAAAACCTA
CTTCCTTTTGCATAGTAGCAATTTTGGTCAAATATGAAGTACTTTTTAACTCGTTTTATA
ATGAAGCTTTTAATAGCCACATAGTTTATCTATAGTGAGTTAAATAAAATGAGCTTTACT
TAATAGTTAAATGACAGAAGGGTATCTGATAATTTGTCACATTCATTGATGTCTTGCACT
GTTATTTCTTTTCTTCCTGGTGCATTTAAGGACTGTCTGACATTTGTACTCTTGCTATTG
GTTTAGGCTTTGCTGTGTAAATCTAGTTAGGTTTTTTTTTTTTTTTTTTCCCATCTTTTT
AGGGCTGTACCCGAGGTGTGTGGAGGTTCTCAGCCTAGGCATCTAATCTGAGCTGTAGCT
GCCGGCCTCCGCCACAGCAATGATAGATCTGAGCTGCGTCTGCAGCCTGCACCACAGCCC
ACGGCAACACTGGCTCCATGACCA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-108, gnl|bosTau2|chr5 (41429847-41429954)
               

               
               1-108, gnl|Hg17|chr14 (96067571-96068422)
               

               
               1-108, gnl|Mm7|chr12 (103306360-103307143)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-108, gnl|bosTau2|chr5 (41429847-41429954)
               

               
               1-108, gnl|Hg17|chr14 (96067571-96068422)
               

               
               1-108, gnl|Mm7|chr12 (103306360-103307143)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               spl (0.143184)
               

               
               eep (0.122564)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)
               

               
               eep (0.122564)

	1-108, gnl\|bosTau2\|chr5 (41429847-41429954)
	1-108, gnl\|Hg17\|chr14 (96067571-96068422)
	1-108, gnl\|Mm7\|chr12 (103306360-103307143)