Ss1.1-rspl31_c17.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCTGAGTAAAGACCTGGGAAATCAGTGTGCACGAGGCAGTCTTCTTGGCAAGTGCTGCGA CAATTATGAAAAACACCTCGGCGGGGATGGATTCATCTGACATTCAGAGGACAAGCATAG CTGTCATTGGTGGTGGCTTGGTTGGATCCTTAAATGCGTGCTTCCTCGCCAAGAGGAATT TCCAAGTTGATGTATATGAATCCAGGGAAGATATCCGAATGGCTGAATTTGCACGTGGAA GAAGCATTAATTTGGCCCTTTCTTATAGAGGAAGACAAGCCTTGAAAGCCATTGGTCTGG AAGATCAGATTGTATCCCAAGGTATCCCCATGAGAGCAAGAATGATCCACTCTCTTTCAG GAAAAAAGTCCGCAATTCCCTATGGGACAAAGTCACAGTATATTCTTTCTATAAGCAGAG AAAATCTAAACAAGGATCTATTGACCGCTGTTGAGAAATATCCCAACGCAAAGGTGCACT TTGGCCACCAGCTGTTGAAGTGTCGCCCTGAGACAGGAGTGATCACCTTGCTTGGACCTG ACAAAGTTCCCAAAGATATCGCCTGTGACCTCATCTTGGGATGTGATGGTGCCTATTCGA CTGTCAGAACTCATCTCTTGAAGAAGCCTCGCTTTGATTACAGTCAGCAGTACATTCCTC ACGGCTACATGGAGTTGACTATCCCACCTCAGAACGGCGACTTTGCCATGGAACCTAATT ATCTGCATATTTGGCCTAGAGATACCTTTATGATGATTGCACTTCCTAACATGAACAAAT CTTTCACGTGTACTTTGTTCATGCCCTTTGAAGAGTTTGAAAAATTGCTCACGAGTCGTG ATGTGCTGGATTTCTTCCAGAAGTACTTTCCGGATTCTCTTCATCTAATTGGAAAAGAAG CCCTGGCCCAAGACTTCTTTCGGTTGCCCGCCCAGCCCATGATCTCCGTTAAGTGCTCTT CTTTTCACTTCAATTCACACTGTGTGCTGATGGGAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCTGAGTAAAGACCTGGGAAATCAGTGTGCACGAGGCAGTCTTCTTGGCAAGTGCTGCGA CAATTATGAAAAACACCTCGGCGGGGATGGATTCATCTGACATTCAGAGGACAAGCATAG CTGTCATTGGTGGTGGCTTGGTTGGATCCTTAAATGCGTGCTTCCTCGCCAAGAGGAATT TCCAAGTTGATGTATATGAATCCAGGGAAGATATCCGAATGGCTGAATTTGCACGTGGAA GAAGCATTAATTTGGCCCTTTCTTATAGAGGAAGACAAGCCTTGAAAGCCATTGGTCTGG AAGATCAGATTGTATCCCAAGGTATCCCCATGAGAGCAAGAATGATCCACTCTCTTTCAG GAAAAAAGTCCGCAATTCCCTATGGGACAAAGTCACAGTATATTCTTTCTATAAGCAGAG AAAATCTAAACAAGGATCTATTGACCGCTGTTGAGAAATATCCCAACGCAAAGGTGCACT TTGGCCACCAGCTGTTGAAGTGTCGCCCTGAGACAGGAGTGATCACCTTGCTTGGACCTG ACAAAGTTCCCAAAGATATCGCCTGTGACCTCATCTTGGGATGTGATGGTGCCTATTCGA CTGTCAGAACTCATCTCTTGAAGAAGCCTCGCTTTGATTACAGTCAGCAGTACATTCCTC ACGGCTACATGGAGTTGACTATCCCACCTCAGAACGGCGACTTTGCCATGGAACCTAATT ATCTGCATATTTGGCCTAGAGATACCTTTATGATGATTGCACTTCCTAACATGAACAAAT CTTTCACGTGTACTTTGTTCATGCCCTTTGAAGAGTTTGAAAAATTGCTCACGAGTCGTG ATGTGCTGGATTTCTTCCAGAAGTACTTTCCGGATTCTCTTCATCTAATTGGAAAAGAAG CCCTGGCCCAAGACTTCTTTCGGTTGCCCGCCCAGCCCATGATCTCCGTTAAGTGCTCTT CTTTTCACTTCAATTCACACTGTGTGCTGATGGGAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 8-142, gnl|bosTau2|chr16 (24038928-24038790) | |
| 8-142, gnl|canFam2|chr7 (35910270-35910781) | |
| 8-142, gnl|dasNov1|scaffold_51340 (4912-5414) | |
| 8-142, gnl|echTel1|scaffold_284364 (1223-1703) | |
| 8-142, gnl|hg17|chr1 (238021393-238021906) | |
| 8-142, gnl|Hg17|chr1 (238021693-238021841) | |
| 8-142, gnl|loxAfr1|scaffold_1717 (22790-23302) | |
| 8-142, gnl|mm7|chr1 (175598168-175598621) | |
| 8-142, gnl|monDom2|scaffold_13 (42501236-42500677) | |
| 8-142, gnl|oryCun1|scaffold_170732 (8551-9029) | |
| 8-142, gnl|panTro1|chr1 (222030154-222030664) | |
| 8-142, gnl|rheMac2|chr1 (215517066-215516558) | |
| 8-142, gnl|rn3|chr13 (91552100-91552557) | |
| 535-700, gnl|bosTau2|chr16 (23999103-23998938) | |
| 535-700, gnl|Hg17|chr1 (238051507-238051672) | |
| 535-700, gnl|Mm7|chr1 (175615434-175615599) | |
| 764-900, gnl|bosTau2|chr16 (23995599-23995464) | |
| 764-900, gnl|canFam2|chr7 (35947998-35948150) | |
| 764-900, gnl|danRer3|chr13 (42717421-42717292) | |
| 764-900, gnl|dasNov1|scaffold_45181 (14491-14339) | |
| 764-900, gnl|fr1|chrUn (194323664-194323534) | |
| 764-900, gnl|galGal2|chr7 (7029312-7029464) | |
| 764-900, gnl|hg17|chr1 (238055808-238055960) | |
| 764-900, gnl|Hg17|chr1 (238055823-238055958) | |
| 764-900, gnl|loxAfr1|scaffold_1717 (64165-64317) | |
| 764-900, gnl|mm7|chr1 (175617851-175617998) | |
| 764-900, gnl|Mm7|chr1 (175617866-175617996) | |
| 764-900, gnl|monDom2|scaffold_13 (42470729-42470565) | |
| 764-900, gnl|oryCun1|scaffold_213549 (46696-46547) | |
| 764-900, gnl|panTro1|chr1 (222064774-222064926) | |
| 764-900, gnl|rheMac2|chr1 (215482160-215482008) | |
| 764-900, gnl|rn3|chr13 (91572887-91573037) | |
| 764-900, gnl|tetNig1|chrUn_random (83640175-83640323) | |
| 764-900, gnl|xenTro1|scaffold_371 (344226-344366) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 8-142, gnl|bosTau2|chr16 (24038928-24038790) | |
| 8-142, gnl|canFam2|chr7 (35910270-35910781) | |
| 8-142, gnl|dasNov1|scaffold_51340 (4912-5414) | |
| 8-142, gnl|echTel1|scaffold_284364 (1223-1703) | |
| 8-142, gnl|hg17|chr1 (238021393-238021906) | |
| 8-142, gnl|Hg17|chr1 (238021693-238021841) | |
| 8-142, gnl|loxAfr1|scaffold_1717 (22790-23302) | |
| 8-142, gnl|mm7|chr1 (175598168-175598621) | |
| 8-142, gnl|monDom2|scaffold_13 (42501236-42500677) | |
| 8-142, gnl|oryCun1|scaffold_170732 (8551-9029) | |
| 8-142, gnl|panTro1|chr1 (222030154-222030664) | |
| 8-142, gnl|rheMac2|chr1 (215517066-215516558) | |
| 8-142, gnl|rn3|chr13 (91552100-91552557) | |
| 535-700, gnl|bosTau2|chr16 (23999103-23998938) | |
| 535-700, gnl|Hg17|chr1 (238051507-238051672) | |
| 535-700, gnl|Mm7|chr1 (175615434-175615599) | |
| 764-900, gnl|bosTau2|chr16 (23995599-23995464) | |
| 764-900, gnl|canFam2|chr7 (35947998-35948150) | |
| 764-900, gnl|danRer3|chr13 (42717421-42717292) | |
| 764-900, gnl|dasNov1|scaffold_45181 (14491-14339) | |
| 764-900, gnl|fr1|chrUn (194323664-194323534) | |
| 764-900, gnl|galGal2|chr7 (7029312-7029464) | |
| 764-900, gnl|hg17|chr1 (238055808-238055960) | |
| 764-900, gnl|Hg17|chr1 (238055823-238055958) | |
| 764-900, gnl|loxAfr1|scaffold_1717 (64165-64317) | |
| 764-900, gnl|mm7|chr1 (175617851-175617998) | |
| 764-900, gnl|Mm7|chr1 (175617866-175617996) | |
| 764-900, gnl|monDom2|scaffold_13 (42470729-42470565) | |
| 764-900, gnl|oryCun1|scaffold_213549 (46696-46547) | |
| 764-900, gnl|panTro1|chr1 (222064774-222064926) | |
| 764-900, gnl|rheMac2|chr1 (215482160-215482008) | |
| 764-900, gnl|rn3|chr13 (91572887-91573037) | |
| 764-900, gnl|tetNig1|chrUn_random (83640175-83640323) | |
| 764-900, gnl|xenTro1|scaffold_371 (344226-344366) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| lun (0.150489) | |
| spl (0.143184) |