Ss1.1-rspl31_k1.5
|
TGGCGGCGCCAGGAATCGGGGAAGCCAGCATGCCTCGCTATGCGCAGCTGGTCATGGGCC
CCGCTGGCAGCGGAAAGAGCACCTACTGTGCCACCATGGTCCAGCACTGTGAAGCCCTCA
ATCGGTCTGTCCAAGTTGTGAACCTAGATCCTGCAGCAGAACACTTCAGCTATTCCGTGA
TGGCTGACATCCGGGAACTGATTGAGGTGGATGACGTGATGGAGGACAATACTCTGCAGT
TCGGTCCCAATGGAGGATTGGTATTTTGCATGGAGTACTTTGCCAATAATTTTGACTGGC
TAGAGAATTGCCTTGGCCATGTAGAGGATGACTACATCCTTTTTGACT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGGCGGCGCCAGGAATCGGGGAAGCCAGCATGCCTCGCTATGCGCAGCTGGTCATGGGCC
CCGCTGGCAGCGGAAAGAGCACCTACTGTGCCACCATGGTCCAGCACTGTGAAGCCCTCA
ATCGGTCTGTCCAAGTTGTGAACCTAGATCCTGCAGCAGAACACTTCAGCTATTCCGTGA
TGGCTGACATCCGGGAACTGATTGAGGTGGATGACGTGATGGAGGACAATACTCTGCAGT
TCGGTCCCAATGGAGGATTGGTATTTTGCATGGAGTACTTTGCCAATAATTTTGACTGGC
TAGAGAATTGCCTTGGCCATGTAGAGGATGACTACATCCTTTTTGACT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
186-346, gnl|bosTau2|chr17 (30260024-30260184) |
|
186-346, gnl|canFam2|chr26 (11302396-11302586) |
|
186-346, gnl|danRer3|chr21 (7196734-7196927) |
|
186-346, gnl|dasNov1|scaffold_62491 (5998-5834) |
|
186-346, gnl|echTel1|scaffold_246914 (1639-1449) |
|
186-346, gnl|fr1|chrUn (292379124-292378949) |
|
186-346, gnl|galGal2|chr15 (5231833-5231652) |
|
186-346, gnl|hg17|chr12 (109360211-109360402) |
|
186-346, gnl|Hg17|chr12 (109360388-109360228) |
|
186-346, gnl|loxAfr1|scaffold_8228 (23224-23415) |
|
186-346, gnl|mm7|chr5 (121612867-121612677) |
|
186-346, gnl|Mm7|chr5 (121612688-121612848) |
|
186-346, gnl|monDom2|scaffold_97 (896538-896356) |
|
186-346, gnl|oryCun1|scaffold_106916 (20159-20348) |
|
186-346, gnl|rheMac2|chr11 (111390339-111390530) |
|
186-346, gnl|rn3|chr12 (35251261-35251451) |
|
186-346, gnl|tetNig1|chrUn_random (90797207-90797393) |
|
186-346, gnl|xenTro1|scaffold_501 (508643-508823) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
186-346, gnl|bosTau2|chr17 (30260024-30260184) |
|
186-346, gnl|canFam2|chr26 (11302396-11302586) |
|
186-346, gnl|danRer3|chr21 (7196734-7196927) |
|
186-346, gnl|dasNov1|scaffold_62491 (5998-5834) |
|
186-346, gnl|echTel1|scaffold_246914 (1639-1449) |
|
186-346, gnl|fr1|chrUn (292379124-292378949) |
|
186-346, gnl|galGal2|chr15 (5231833-5231652) |
|
186-346, gnl|hg17|chr12 (109360211-109360402) |
|
186-346, gnl|Hg17|chr12 (109360388-109360228) |
|
186-346, gnl|loxAfr1|scaffold_8228 (23224-23415) |
|
186-346, gnl|mm7|chr5 (121612867-121612677) |
|
186-346, gnl|Mm7|chr5 (121612688-121612848) |
|
186-346, gnl|monDom2|scaffold_97 (896538-896356) |
|
186-346, gnl|oryCun1|scaffold_106916 (20159-20348) |
|
186-346, gnl|rheMac2|chr11 (111390339-111390530) |
|
186-346, gnl|rn3|chr12 (35251261-35251451) |
|
186-346, gnl|tetNig1|chrUn_random (90797207-90797393) |
|
186-346, gnl|xenTro1|scaffold_501 (508643-508823) |
|
spl (0.143184) |
|
pla (0.133672) |
|
nmm (0.132802) |
|
cov (0.132153) |
|
ova (0.129132) |
|
spl (0.143184) |
|
pla (0.133672) |
|
nmm (0.132802) |
|
cov (0.132153) |
|
ova (0.129132) |
