Non-Coding RNA Search

Ss1.1-rspl32_o7.5

Sequence:


               
               ATTTTTGTTATCTGGGGGCTTTGGGGGGTGCTTTTTGTTTTGATTTTGCCAAATGTAACA
TGAAAGCAAAATGCTGCAGCTTTAGTCAGTTATGCTGATTTAGTAAAAAGAAAAAAAAAA
GTTTACATATACAGCTTGCTTTCTATGATTCTGTGAAATTTGCTTCCTAAAGTTTCTGTG
CAGTTTTAGTAAGACTATAGTGATTAATTTGAAGAGCTTGCGTTGAAAAACAAAATGTAA
TAGGGAATAAATATAGAATGCAGTTGGTCAAGAATTTTGAGAGGATGACAAGGTTAAAAG
AGAGTAACCAGTAGGATTTTGAAATATAACCTTTCAAAATGTTGATGCTTTCAAGTGAAA
GTTCTAAACATTTATGATTAGTTTTCATCTTCACTTCTCCCATAGGAAATAAAGCATGTG
CAAGGATATTTGAAGTTTCAGAGGACTGTTCTTAAAATGACCTTGCTTGGCTGTTTTGTT
TTAGAAATATTGTCATGCATGAGAATGTTGTGAGAGAGGAATCATGCGAAATAGATTTAT
TCCTTTGTCTGACATCCTACAGGCTTAAGGAGTGGTAATCATTCTGAATGCTTCCATAGT
TCAGACTGTCTTTGTTGATTTTTTTTTTTTTAAGTTAGATGGCATAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTTTGTTATCTGGGGGCTTTGGGGGGTGCTTTTTGTTTTGATTTTGCCAAATGTAACA
TGAAAGCAAAATGCTGCAGCTTTAGTCAGTTATGCTGATTTAGTAAAAAGAAAAAAAAAA
GTTTACATATACAGCTTGCTTTCTATGATTCTGTGAAATTTGCTTCCTAAAGTTTCTGTG
CAGTTTTAGTAAGACTATAGTGATTAATTTGAAGAGCTTGCGTTGAAAAACAAAATGTAA
TAGGGAATAAATATAGAATGCAGTTGGTCAAGAATTTTGAGAGGATGACAAGGTTAAAAG
AGAGTAACCAGTAGGATTTTGAAATATAACCTTTCAAAATGTTGATGCTTTCAAGTGAAA
GTTCTAAACATTTATGATTAGTTTTCATCTTCACTTCTCCCATAGGAAATAAAGCATGTG
CAAGGATATTTGAAGTTTCAGAGGACTGTTCTTAAAATGACCTTGCTTGGCTGTTTTGTT
TTAGAAATATTGTCATGCATGAGAATGTTGTGAGAGAGGAATCATGCGAAATAGATTTAT
TCCTTTGTCTGACATCCTACAGGCTTAAGGAGTGGTAATCATTCTGAATGCTTCCATAGT
TCAGACTGTCTTTGTTGATTTTTTTTTTTTTAAGTTAGATGGCATAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-607, gnl|bosTau2|chr26 (26492380-26491748)
               

               
               1-607, gnl|Hg17|chr10 (119032259-119031617)
               

               
               1-607, gnl|Mm7|chr19 (59221232-59220659)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-607, gnl|bosTau2|chr26 (26492380-26491748)
               

               
               1-607, gnl|Hg17|chr10 (119032259-119031617)
               

               
               1-607, gnl|Mm7|chr19 (59221232-59220659)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               spl (0.143184)
               

               
               kid (0.129735)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)
               

               
               kid (0.129735)

	1-607, gnl\|bosTau2\|chr26 (26492380-26491748)
	1-607, gnl\|Hg17\|chr10 (119032259-119031617)
	1-607, gnl\|Mm7\|chr19 (59221232-59220659)